Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g1059 ATGGAGAAGAACCAACCTGAAATTCAAAACCTTCCTGAGAAAACCTTTAGCTTTGCTCGAAGGGAAGATGGGCCCAAATTGGATGTTGATGATCCTGATAAAAATGTGGAGCTTGATGTCAATTCATTGCCTGAGATAACTGAAGATCATGAGAAAGAGAAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAACAAGGATGAAGAATCCCAGATTGATGTTCCAGCTGATCTCCATTCTAGTCTCGAGACGATTCGTGAAGATATCGATCAGTTTCTGTCGTCTCCTCCTCGTGATCGAGATGAGTTACAGATCCCTCCTTTTATTGAGAAATTCTTGGATCTCGTGGATGCAAAGATTTCACAATATGATATTAATGCAGAATCGAAATCCAAAGGATGTGTAATTCCTGAGGACCAAGTGTCGTTTCTCGAAGCTGTCGATAGGATATCGAAGCTAAAGAATGTACTCCATGAAATGAAATTGGAAGAGGAAAAAAGTTCATTGATTAATCGAATTGGGAGCACTCAACAACGAGCATTTTCTTATTTAGAGGAAGAATTCAGGTTCTTTCTTGAGGAATCAAGAATCGGAGATTCGGATCCGATGGAAGCGAAGCACGAACCGGACCGTTGTATATTACCAGACCCTGAATCCATGGCGTCAGATCAAGATCAATTTCCAGGATACTCTGATGAGATCACATCCTATTTGAACAAAATAGCAAAGGAAATGATTGCGGGTGGATACGAATCCGAATGTTGCCAAGTTTATATCATCGCTAGAAGAAATATATTTGAGGACATCTTACACAAACAAGGATTTGAGAAGCATAGTATTGATGATGTCCAGAAAATGAATTGGGATTCAATGGAGAGAGAGATTGGAACATGGATCAAAACATTCAAGCAATGTGCTACGGTTTTCTTCGCAGGAGAACGAAAACTTGCCGAAGCTGTTTATTCAATGAATCCTTCAATCTCTGCCAGTTTGTTTAGCAATCTAATGCGCGGCATTGTCATACAATTGCTGAATTTCTCTGAAGGAGTTGCAATGACGAAGCGGTCGGCAGAGAAATTGTTTAAACTTCTTGATATGTATGAGGCTCTGCGTGATATGGTACCGAAAATGGAGGGTTTATTTCCTGATGAGTGTGCTAATGAGTTGAAGACTGAGACTACAACTGCTCGTTCTCGTCTTGCTGAAGCAGCGATTTATATATTTTGTGATCTTGAAAACTCTATCAAAGCTGATACCGGAAAAACTCCGGTACCTGGTGGTGCTGTTCATCCATTGACTCGTTATACCATAAACTACTTGAAATATGCTTGTGAGTACAAGAACACTCTGGAACAGATTTTCAAAGATCATTCGAGAATCGAGCGTGCCGATTCGACAAGCCGACCGCATTACGAAGGAGAGGCAGCAGGGAACTTCAATGCTAGCAATGAGGAAACACAATCTCCATTTTCGGTGCAGCTAATGAGGGTGATGGAGCTGTTGGATTCAAATCTGGAAGGGAAATCAAAGCTATACAAAGATATATCACTGAGTTCCATTTTCATGATGAACAATGGACGATATATCTTGCAGAAGATCAAGGGATCTGCAGAGATCAATGAAGTGATGGGCGATACGTGGTATCGAAAGCGGTCAGCAGATCTTCGTCAATACCATAAGAATTATCAAAGAGAGACATGGAGTAGATTGTTGGGTTGTTTAAATCATGAGGGATTGACTGTGAATGGGAAGGTGGTAAAGCCAGTGCTGAAAGAGAGATTTAAAAGCTTCAATACAATGTTTGAAGAGATTCACAAGACACAAAGCTCATGGATCATAAGCGACGAGCAACTTCAATCGGAGCTTCGAGTTTCGATATCGGCAGTGATGATTCCGGCTTACAGATCATTCTTAGGGAGATTTTCTCAGAACTTGGATCCAGGAAGACAAACAGAGAAATATATTAAGTTTCAGCCTGATGATATAGAAACCTATATAGATGATCTATTTGATGGAAACCCAACTTCAATGGCGAGAAGGAGATAA 2049 40.9 MEKNQPEIQNLPEKTFSFARREDGPKLDVDDPDKNVELDVNSLPEITEDHEKEKEEEEEEEKEKENKDEESQIDVPADLHSSLETIREDIDQFLSSPPRDRDELQIPPFIEKFLDLVDAKISQYDINAESKSKGCVIPEDQVSFLEAVDRISKLKNVLHEMKLEEEKSSLINRIGSTQQRAFSYLEEEFRFFLEESRIGDSDPMEAKHEPDRCILPDPESMASDQDQFPGYSDEITSYLNKIAKEMIAGGYESECCQVYIIARRNIFEDILHKQGFEKHSIDDVQKMNWDSMEREIGTWIKTFKQCATVFFAGERKLAEAVYSMNPSISASLFSNLMRGIVIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMVPKMEGLFPDECANELKTETTTARSRLAEAAIYIFCDLENSIKADTGKTPVPGGAVHPLTRYTINYLKYACEYKNTLEQIFKDHSRIERADSTSRPHYEGEAAGNFNASNEETQSPFSVQLMRVMELLDSNLEGKSKLYKDISLSSIFMMNNGRYILQKIKGSAEINEVMGDTWYRKRSADLRQYHKNYQRETWSRLLGCLNHEGLTVNGKVVKPVLKERFKSFNTMFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLGRFSQNLDPGRQTEKYIKFQPDDIETYIDDLFDGNPTSMARRR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36946672 36948720 + evm.model.ptg000009l.189 HCH10g1059 553132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g1059 682 MobiDBLite consensus disorder prediction 16 50 - -
HCH10g1059 682 Coils Coil 43 74 - -
HCH10g1059 682 MobiDBLite consensus disorder prediction 1 76 - -
HCH10g1059 682 FunFam Exocyst subunit Exo70 family protein 128 679 - -
HCH10g1059 682 SUPERFAMILY Cullin repeat-like 140 672 IPR016159 -
HCH10g1059 682 Pfam Exocyst complex component Exo70 N-terminal 114 194 - -
HCH10g1059 682 PANTHER EXOCYST COMPLEX PROTEIN EXO70 78 674 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
HCH10g1059 682 MobiDBLite consensus disorder prediction 51 65 - -
HCH10g1059 682 Gene3D Exocyst complex component Exo70 121 681 - -
HCH10g1059 682 Pfam Exo70 exocyst complex subunit C-terminal 298 669 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g1059 HCH-Chr10:36946672 HCH5g1180 HCH-Chr5:40549821 3.30E-162 dispersed
HCH10g1059 HCH-Chr10:36946672 HCH3g0443 HCH-Chr3:2826887 3.60E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g1059 K07195 - csv:101206040 981.859