Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g1077 | ATGTCTAAAGAAGAGATTATCATTTTAGATTGTTTACTCAGCCCTTTTTGCACAAGGGTGAAGATCGCATTGAATGAAAAGGGAGTGGCATACGAGAGTAGAGAAGAGGATTTGTTTGGAGGGAAAAGTGAGTTGTTGCTAAAATCTAATCCCATATACAAAAAAGTGCCTGTTCTCTTGCATAATGGTAAACCATTGAGTGAAAGTGCCATTATAGTAAACTATATTGAAGAGACCTGGCCTTCCCCCCCATTGCTTCCTTCTTGTGCATATGGAAGAGCTCAAGCTCGGTTTTGGGTTGATTACATTGACAAAAAGGTATTTGAAACGGGTGGCAAGATCTGGAGGAGCAATGGAGAAGAGCAAGAGGGTGCCTTAAAGGAATTCTTAGAGACTGTGAAGCAGTTAGAAGAAGCTCTGGGAGACAAGGATTTCTTTGGTGGTGACAGTTTTGGGTTCGTGGATGTTATTGCAATCCCAATTACCAGTTGGTTCCACGCTTACGAGAAAGTTGGAAACTTCAAAATAGAAGATCACTCTCCCAAATTTTCAGCCTGGCAAAACAGGTGTTTGCTGAGAGAGACTGTTGCCAGTGTCATCCCTGACTCTCAGAGGGTCTACGACTTTGTCATCTCCATGAGGAAGAAGTTTGGTCTCGAATAA | 663 | 42.23 | MSKEEIIILDCLLSPFCTRVKIALNEKGVAYESREEDLFGGKSELLLKSNPIYKKVPVLLHNGKPLSESAIIVNYIEETWPSPPLLPSCAYGRAQARFWVDYIDKKVFETGGKIWRSNGEEQEGALKEFLETVKQLEEALGDKDFFGGDSFGFVDVIAIPITSWFHAYEKVGNFKIEDHSPKFSAWQNRCLLRETVASVIPDSQRVYDFVISMRKKFGLE | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 38552622 | 38553982 | + | evm.model.ptg000009l.207 | HCH10g1077 | 553150 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g1077 | 220 | Gene3D | Glutaredoxin | 1 | 88 | - | - | |
HCH10g1077 | 220 | SFLD | Main.3: Omega- and Tau-like | 2 | 218 | IPR045073 | - | |
HCH10g1077 | 220 | SUPERFAMILY | GST C-terminal domain-like | 78 | 217 | IPR036282 | - | |
HCH10g1077 | 220 | SUPERFAMILY | Thioredoxin-like | 12 | 107 | IPR036249 | - | |
HCH10g1077 | 220 | Pfam | Glutathione S-transferase, C-terminal domain | 121 | 186 | - | - | |
HCH10g1077 | 220 | Gene3D | - | 90 | 220 | - | - | |
HCH10g1077 | 220 | CDD | GST_N_Tau | 6 | 80 | - | - | |
HCH10g1077 | 220 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 209 | IPR010987 | - | |
HCH10g1077 | 220 | CDD | GST_C_Tau | 90 | 210 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
HCH10g1077 | 220 | FunFam | Tau class glutathione S-transferase | 1 | 88 | - | - | |
HCH10g1077 | 220 | Coils | Coil | 119 | 139 | - | - | |
HCH10g1077 | 220 | SFLD | Main (cytGST) | 2 | 218 | - | - | |
HCH10g1077 | 220 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 4 | 84 | IPR004045 | - | |
HCH10g1077 | 220 | FunFam | Glutathione S-transferase U20 | 89 | 220 | - | - | |
HCH10g1077 | 220 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 8 | 210 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
HCH10g1077 | 220 | Pfam | Glutathione S-transferase, N-terminal domain | 9 | 78 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g1077 | HCH-Chr10:38552622 | HCH6g0589 | HCH-Chr6:34891142 | 2.30E-64 | dispersed | |
HCH10g1077 | HCH-Chr10:38552622 | HCH3g0054 | HCH-Chr3:322409 | 5.50E-34 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g1077 | K00799 | - | csv:101213628 | 337.035 |