Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g1185 ATGCCAGACGTACAAGCCCTTGTGAATGATTTCATTATCAAGCTTAAAAAGCGTAAAATTGAGGGCTCCTTGGCCACGGCGAAGCATACAGCTGAATTGCTTCGGTCGGTTATTTCGCAGCAGCGAATACCTTATACAAATCAAGCTGGCGCTTTGATTAATGCTGTTAAAGCTGTTGGCGAGCAGCTGATTGCTGCCAATCCTGTTGAACTTGCTGTGGGTAATATTGTGAGGCGTGTTTTACACATTATTAGAGAGGAGGATCTCTCTCTCACCACAGCTACTATGGCTGGGTTGAGCTTATCAGCTGTTAGTGATGATGAAGATGATAATGAAAAAGATGATCACCCGGTCCTGTCAGCAGCTGCAGTTGCTGCTGCTGCAAGAAGCACTCTGCGTCCACCTTCCTTGCAGACTCTTCTTGAGGATGTTCCTAACCCAACATCTTTTCATCAAACTTCATCATCCGGAGGTGATTCTGAAGGAAAAAGTAAATCCGCGGATAGAAGTTCAAGGAGTCGGAAACTGAAGCATGATGTGATTGAAGCTGTGAATGAACTTATTCAGGATATTGCAACTTGCCATGAACAGATTGCTGAGCAAGCAGTTGAACATATCCATCAAAACGAGGTAATATTAACTCTTGGGAGTTCCAGAACAGTACTGGAATTTCTTTGTGCTGCAAAGGAGAAGAAAAGGTCCTTTCGGGTGTTCATTGCTGAGGGTGCTCCGAGATATCAGGGCCATCTTCTTGCCAAGGAATTAGTTACAAGAGGTTTACAAACCACACTTATTACTGATTCTGCAGTGTTTGCTATGATCTCCCGGGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCCAATGGTGGTGTCATTGCTCCTGTTGGGTTGAATATGTTGGCCCTTGCTGCTAAAAGGCATGCAGTTCCTTTTGTTGTACTAGCTGGAAGTCACAAGCTATGCCCTCTATATCCTCACAATCCTGAAGTTCTACTCAACGAACTGAGATCCCCATCAGAACTACTGGATTTTGGTGAATTTTCAGATTGCATGGACTTTGGAGCTAACACTGGTTCTCAACTTCTCCATGTGGTCAATCCAACATTTGACTATGTGCCACCATCGCTTGTTAGTCTGTTTATTACTGACACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTTCTGATTATTATTCAGCTGATGATTTGGAGATTAAACGGAGGCCTTCTGCGGGGAGTTCATTGTAG 1260 43.89 MPDVQALVNDFIIKLKKRKIEGSLATAKHTAELLRSVISQQRIPYTNQAGALINAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTATMAGLSLSAVSDDEDDNEKDDHPVLSAAAVAAAARSTLRPPSLQTLLEDVPNPTSFHQTSSSGGDSEGKSKSADRSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFIAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMLALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGANTGSQLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLISDYYSADDLEIKRRPSAGSSL 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42303077 42308330 + evm.model.ptg000009l.315 HCH10g1185 553258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g1185 419 FunFam translation initiation factor eIF-2B subunit beta 194 402 - -
HCH10g1185 419 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 3 408 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
HCH10g1185 419 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 406 IPR037171 -
HCH10g1185 419 Gene3D - 194 401 IPR042529 -
HCH10g1185 419 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237(InterPro)
HCH10g1185 419 MobiDBLite consensus disorder prediction 139 176 - -
HCH10g1185 419 MobiDBLite consensus disorder prediction 162 176 - -
HCH10g1185 419 MobiDBLite consensus disorder prediction 139 161 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g1185 K03754 - csv:101220366 734.561