Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g1224 ATGCCATCATCTGAAATTCTCCCCATTTCCCATTCCAGATCTTCTGCAACAATGTTACTTAAAGAAGAAGATGATCCAAAAACTACCCTTTTCGTTTCTTCTTCATTTGAAGATGAAAAAACCTTTTCCTTTAAACCCCTTCTCTCACGTACTAGGAGTTGCATTACCATGACAACTCCAGCCGCTGCCACTGCTGATTTCAACCGGCAGAGACGGCGGCAGATCGCCGGCGAAGATTCGTTGTCCAGTCTTCGTCGCGGCCGCCGTTCTTTCGGAAGTAATGTTGGGCATGCTGTGGCTGAGACATTCCTGGTTACTCGTTTGAGTTTGAGACTTTTGAGATATCTTGGGATAGGCTACAGATGGATTGCAAGAGTTTTATCCCTTGGATGTTATGCATTTTTTCTTTTCCCAGGTTTTCTTCAAGTTGGATATTATTATTTTTTCTCCAGTCAGATTCGAAGAAGCATAGTTTATGGTGATCAACCGAGAAATAGGTTGGATCTATATCTACCAAAAAGTAGGGATGGTCTTAAGCCAGTGGTTGCATTTGTAACAGGTGGAGCCTGGATTATAGGTTATAAAGCATGGGGTTCTCTACTTGGATTTCAGTTATCAGAAAGAGATATTATAGTAGCATGCATTGACTACAGAAATTTCCCCCAAGGAACCATGAGTGATATGATAAAGGATGCTTCTCAAGGTATCTCATTTCTATACAATAATATTGCTGAATATGGAGGTGATCCAAACAGGATTTTTCTAATGGGACAGTCGGCGGGTGCACATATTTCCGCTTGCACACTTTTAGAGCAGGCAATCAAAGAGTCCGGTGGAGATAGCATTTCTTGGAGAGCCTCCAGGATAAAAGCTTTCTTTGGTTTGTCCGGGGGGTACAATTTGTTAAATCTAGTGGATTACTTTCACAGTCGAGGCCTATATCGATCCATCTTTTTAAGCATAATGGAAGGGGAAGATTCCTTGCAAAAATTTTCTCCTGAAGTTATGGTACAGGATCCAAAGATTAGACAGACAGTTTCCCTGCTTCCACGCTTCATTCTATTTCATGGAACTGCAGATTATTCCATACCATCAGATGCCAGTAAGAGTTTTGCAGAAACTCTTGAAAGAGTTGGAGTAAAAGCGGAAGCAGTTTTGTATGAAGGAAAGACGCATACGGATTTATTTCTTCAGGATCCAATGAGAGGTGGTAGAGATCAGTTGTTTGAAGATCTGGTTGGCATCATTCATGAAAATGATACGGAAGCTCTAATTAGAGATGCAGTGGCTCCTCAAAGGAGACGCCTCGTACCTGAATTTTTATTGAAATTAGCCCGTAGTGTTAGCCCATTCTGA 1356 41.52 MPSSEILPISHSRSSATMLLKEEDDPKTTLFVSSSFEDEKTFSFKPLLSRTRSCITMTTPAAATADFNRQRRRQIAGEDSLSSLRRGRRSFGSNVGHAVAETFLVTRLSLRLLRYLGIGYRWIARVLSLGCYAFFLFPGFLQVGYYYFFSSQIRRSIVYGDQPRNRLDLYLPKSRDGLKPVVAFVTGGAWIIGYKAWGSLLGFQLSERDIIVACIDYRNFPQGTMSDMIKDASQGISFLYNNIAEYGGDPNRIFLMGQSAGAHISACTLLEQAIKESGGDSISWRASRIKAFFGLSGGYNLLNLVDYFHSRGLYRSIFLSIMEGEDSLQKFSPEVMVQDPKIRQTVSLLPRFILFHGTADYSIPSDASKSFAETLERVGVKAEAVLYEGKTHTDLFLQDPMRGGRDQLFEDLVGIIHENDTEALIRDAVAPQRRRLVPEFLLKLARSVSPF 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43470546 43495814 + evm.model.ptg000009l.354 HCH10g1224 553297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g1224 451 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 149 400 - -
HCH10g1224 451 SUPERFAMILY alpha/beta-Hydrolases 138 414 IPR029058 -
HCH10g1224 451 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 61 416 IPR050300 GO:0016298(PANTHER)
HCH10g1224 451 Gene3D alpha/beta hydrolase 149 401 IPR029058 -
HCH10g1224 451 Pfam BD-FAE 167 375 IPR049492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH9g0356 HCH-Chr9:2211930 HCH10g1224 HCH-Chr10:43470546 1.20E-149 transposed
HCH1g0819 HCH-Chr1:56840627 HCH10g1224 HCH-Chr10:43470546 3.80E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g1224 K15889 - mdm:103402743 635.565