Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH10g1294 | ATGGGTTTGCAAAGCCAATTAGATGATTTCTCTTCTGATTCAATCCCTCTTTTCCTCATCTCTTTCTTTGCTAATTTTCTCAACCATCTCCGCTTTTTCTTCCTCCGTCTCCTCCAATCCCTCCCTCTCTCCGCCCCATTCCTCCGCCACCACCACGACGGCGCCGCCGACGGCGACACCCTTTTCCTCGCCGAACAACTTCATTTGAATTGGGTATTCTCTTACCGTTACGGTGGCGGTGTTGACGACTCCGTCGGCGGTGGCTCCGATTGCATCGTTTGCCTTTGTTCGTTATCGGACGGTGACCGTGTACGGCGGCTGAGTTGCCGCCATGTGTTTCATAAAGATTGTTTTGATGGTTGGCTTCATCATCTGAATTTCAACTGCCCTCTTTGCCGATCTCCGCTTGTTTCCGAGGAGCGCGTTCCCTTCACGCGCCGTCGTGTCGGTGAGAATCTCATTGGCTGGGTCTATATTCGATGA | 483 | 51.97 | MGLQSQLDDFSSDSIPLFLISFFANFLNHLRFFFLRLLQSLPLSAPFLRHHHDGAADGDTLFLAEQLHLNWVFSYRYGGGVDDSVGGGSDCIVCLCSLSDGDRVRRLSCRHVFHKDCFDGWLHHLNFNCPLCRSPLVSEERVPFTRRRVGENLIGWVYIR | 160 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 45425401 | 45425883 | + | evm.model.ptg000009l.424 | HCH10g1294 | 553367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH10g1294 | 160 | SUPERFAMILY | RING/U-box | 90 | 138 | - | - | |
HCH10g1294 | 160 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 69 | 146 | - | GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
HCH10g1294 | 160 | SMART | ring_2 | 91 | 132 | IPR001841 | - | |
HCH10g1294 | 160 | Pfam | Ring finger domain | 90 | 133 | IPR001841 | - | |
HCH10g1294 | 160 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 142 | IPR013083 | - | |
HCH10g1294 | 160 | ProSiteProfiles | Zinc finger RING-type profile. | 91 | 133 | IPR001841 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH10g1294 | K16282 | - | vvi:100262985 | 167.933 |