Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH10g1383 ATGGATAGAGTGGAGAGGGGGAGTTTAAGGCAAATTGCGTCTGGGATTACAATATTTGCTCATTTCTTTGGTGTCACAGCCTGCATTCTTATGCTCATTTGGTTGCTTCATTATCGTGGTGGTCTTGGATATGATTCTCCAAATCCTGACCTTGTTTTCAATTGTCACCCCTTCTTCATGCTCTTCGGTTTCGTTTTCTTCGCCGGAGAAGCGATGATGGCATTCAAGACAGTGAGGGGAGAAAAGATAATGAGAAAGATAGTTCACATGTCCTTGCATTTGATAGCTATTTGCATGGGAATTGCTGGGATCAATGCTGCTTTCAAGTTTCATACTATGTCTAACATTGAGGATATGTTTAGCCTCCATTCATGGATTGGCATCGCCACCTTTTGCATTTATGGTTTGCAGTGGCTGGGTGGGCTGTTCACATTTCTGTTTCCAGGAGCAGATGAAGGCACAAAAGCTAGGATGTTGCCATGGCACATAAGTGGGGGAAGGGCATTGCTGTTGATGATAATATGCACAGCCTTGACTGGTTTGATGGAGAAATCCACGTTTTTGAGGCTCAGTGGAAACAATGAATCTCGTTTGATCAACTTCATTGCACTTTGTGTTCTTCTTTTTGGCATTTTTGTTGATATCTCTATTGGGGTTGCTCGTTTTACGCACATTGATCACTCCATTTAG 690 42.61 MDRVERGSLRQIASGITIFAHFFGVTACILMLIWLLHYRGGLGYDSPNPDLVFNCHPFFMLFGFVFFAGEAMMAFKTVRGEKIMRKIVHMSLHLIAICMGIAGINAAFKFHTMSNIEDMFSLHSWIGIATFCIYGLQWLGGLFTFLFPGADEGTKARMLPWHISGGRALLLMIICTALTGLMEKSTFLRLSGNNESRLINFIALCVLLFGIFVDISIGVARFTHIDHSI 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 46394670 46396604 - evm.model.ptg000009l.513 HCH10g1383 553456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH10g1383 229 Gene3D - 11 221 - -
HCH10g1383 229 FunFam Cytochrome b reductase 1 11 225 - -
HCH10g1383 229 PANTHER CYTOCHROME B561-RELATED 16 219 IPR043205 GO:0016491(PANTHER)|GO:0016491(InterPro)
HCH10g1383 229 ProSiteProfiles Cytochrome b561 domain profile. 19 218 IPR006593 -
HCH10g1383 229 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
HCH10g1383 229 CDD Cyt_b561_ACYB-1_like 46 188 - -
HCH10g1383 229 SMART 561_7 55 181 IPR006593 -
HCH10g1383 229 Pfam Eukaryotic cytochrome b561 56 187 IPR006593 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH10g1383 K08360 - csv:101208884 358.992