Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0068 | ATGGACATGGATATCGATAACAACAATTCAACAGCTGAAGGAAGAGAAGGGGAAGGGGAAGGGAAGCTGATGGTGGTGATATTAGTGGGTGCACCAGGAAGCGGCAAATCCACTTTCTGTGAACTCGTAATGGGTTCCTCAAGTCGCCCGTGGGTTCGCATTTGCCAGGATACCATTGGAAATGGGAAGGCCGGAACCAAAGTGCAGTGCTTGAAGAGCGCAGCTAGTGCATTGAGTGATAGAAAGAGTATATTCATCGATAGATGCAATCTTGACATAGAGCAGCGTGCAGAATTTGTGAAACTTGGGGGTCCTCAAGTGGATGTGCATGCTGTTGTTTTAGATCTTCCCGCAAAGCTCTGTATTTCTCGTTCTGTTAAGCGGACTGGTCATGAAGGGAATTTACAAGGTGGAAAAGCTGCTGCTGTTGTGAATAGGATGTTGCAAAAGAAAGAATTGCCCAAGCTAAATGAAGGGTTTACTCGTATAACCTTTTGCCACAGCGAGACTGACGTTCAATCTGCTATTGAAACATACAAATCACTTGGTTCGCTTGATACTCTTCCACATGGATGTTTTGGTCAGAAGAACCCAGATACCAAAGTGCAACTTGGCATTATGAAGTTCTTAAAGAAGGTAGATAATCCTGCTAAGACAGGTTCCAGCACCAATACCAATAAGGATTCTCTAATTTTTCAGACTACCCAGGAAAAGAGCCAGTTATGTGGAAAGGAACAGACTGCCTGCACAATATCCTGCAGTGTTGATAAAGAGCCAGATAAAGGTGAGCATCCAGGTGTAAGATCCTTAGGAGATGATCTTTCTCAAAATGATCCTCCAACTCTTGCATTTCCATCTATTTCGACAGCAGATTTTAAATTCAACCATGAAAAGGCTGCTGAAATTATAGTGGAGACGGTCGAGGAATTCATGGATAAGCTTGGAAATGGCAGACTAGTTTTAGTTGACTTGAGTCATGGGTCGAAGATTTTGTCTTTGGTTGAAGCTAAAGCAGCAAAGAAAAATATCAATTCCAACAAGTTTTTTACGTTTGTTGGAGATATAACTAGACTCAATTCCAAAGGTGGATTGCGCTGCAATGTTATAGCCAATGCTGCTAATTGGCGACTGAAACCTGGAGGTGGTGGTGTCAATGCAGCAATTTTTAGTGCTGCAGGTCCTGGATTGGAAGTGGCAACTAAACAAGAAGCTAACTCCCTTCACCCTGGTAATGCTTTGATTGTTCCATTGCCTTCAATTTCTCCTTTGTTCATTAGGGAAGGGGTAACCCATGTCATACATGTTCTTGGACCCAATATGAATCCACAACGGCCAAATTATCTCGACAGTGACTATGATGAAGGTTGCAAAGTTCTTCGTGCTGCTTACTCTTCCTTATTTCAAGGTTTTGTTTCAATAGTGGAAGATCAGTTTAAGTCTGTGAGGGGAATCCACGAACGCCTTGGCCCAGCACCTTCAGAATCACGAAAGCACTCTGGGGACAGCCCCAGAAGTACCTTCCTTAGTAGTGATCACAAGTTTAAGAGAGAGGATGTGCAAAATTCTGAAAGAAGCAAAAAGTGGAAAGGATCTCAGGATACAGCTGAAGTATTAAATCAAAACAACAATAAGACTGTCCAGAAAGTAAGCAAGCAATGGGGATCATGGGCTCACGCTCTTTACAACACCGCAATGCATCCTGAGAAACATGGTGATACTGTACTGGAGGTATCAGATGATGTTGTAATATTGAATGATATTTATGCGAAGGCACACAAGCATCTCCTGGTAGTGGCTCGGTGTGAAGGTCTGGATCAATTGGACGATTTACGTAGAGAACACCTTCCATTGTTGAGGACTATGCATGCTTTGGGTTTGAAGTGGATTGATAAATTCTTTCATGAAGATGTATCATTGGTTTTTCGCCTCGGATACCACTCGGCTCCATCCATGAGGCAGCTACACCTACATGTTATAAGCCAAGATTTCAACTCGAGTCATCTGAAGAACAAGAAGCACTGGAATTCGTTCAACACCGATTTCTTTAGAGACTCCGTAGATGTTATCGACGAAGTAAGTAACCACGGAAAAGCAAGCATTAAGGATGACGAGAGCTTGATTTCGATGGAGTTGCGTTGCAACAGATGCAGAAGTGCACATCCCAACATTCCAAAATTGAAATTACATATTGCTAAATGTGAAGCCCCATTCCCTTCCACACTGCTCCAAGGTGGTCGTTTAGTGCTTGGACCAAGAAATACTGCCTCTCTCCCATAA | 2277 | 42.95 | MDMDIDNNNSTAEGREGEGEGKLMVVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKAGTKVQCLKSAASALSDRKSIFIDRCNLDIEQRAEFVKLGGPQVDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLNEGFTRITFCHSETDVQSAIETYKSLGSLDTLPHGCFGQKNPDTKVQLGIMKFLKKVDNPAKTGSSTNTNKDSLIFQTTQEKSQLCGKEQTACTISCSVDKEPDKGEHPGVRSLGDDLSQNDPPTLAFPSISTADFKFNHEKAAEIIVETVEEFMDKLGNGRLVLVDLSHGSKILSLVEAKAAKKNINSNKFFTFVGDITRLNSKGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGPGLEVATKQEANSLHPGNALIVPLPSISPLFIREGVTHVIHVLGPNMNPQRPNYLDSDYDEGCKVLRAAYSSLFQGFVSIVEDQFKSVRGIHERLGPAPSESRKHSGDSPRSTFLSSDHKFKREDVQNSERSKKWKGSQDTAEVLNQNNNKTVQKVSKQWGSWAHALYNTAMHPEKHGDTVLEVSDDVVILNDIYAKAHKHLLVVARCEGLDQLDDLRREHLPLLRTMHALGLKWIDKFFHEDVSLVFRLGYHSAPSMRQLHLHVISQDFNSSHLKNKKHWNSFNTDFFRDSVDVIDEVSNHGKASIKDDESLISMELRCNRCRSAHPNIPKLKLHIAKCEAPFPSTLLQGGRLVLGPRNTASLP | 758 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1020492 | 1024452 | + | evm.model.ptg000018l.547 | HCH11g0068 | 553535 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0068 | 758 | FunFam | Transcription factor bHLH140 | 12 | 181 | - | - | |
HCH11g0068 | 758 | FunFam | aprataxin isoform X2 | 554 | 734 | - | - | |
HCH11g0068 | 758 | SUPERFAMILY | Macro domain-like | 334 | 468 | IPR043472 | - | |
HCH11g0068 | 758 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 325 | 481 | IPR043472 | - | |
HCH11g0068 | 758 | ProSiteProfiles | Macro domain profile. | 335 | 596 | IPR002589 | - | |
HCH11g0068 | 758 | MobiDBLite | consensus disorder prediction | 487 | 501 | - | - | |
HCH11g0068 | 758 | Pfam | Macro domain | 371 | 453 | IPR002589 | - | |
HCH11g0068 | 758 | Pfam | C2HE / C2H2 / C2HC zinc-binding finger | 678 | 732 | IPR032566 | - | |
HCH11g0068 | 758 | MobiDBLite | consensus disorder prediction | 508 | 531 | - | - | |
HCH11g0068 | 758 | FunFam | Transcription factor bHLH140 | 328 | 475 | - | - | |
HCH11g0068 | 758 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 266 | 324 | IPR043472 | - | |
HCH11g0068 | 758 | SUPERFAMILY | Macro domain-like | 277 | 317 | IPR043472 | - | |
HCH11g0068 | 758 | Gene3D | - | 6 | 182 | IPR027417 | - | |
HCH11g0068 | 758 | PANTHER | APRATAXIN-RELATED | 86 | 751 | - | GO:0000012(PANTHER)|GO:0003697(PANTHER)|GO:0003725(PANTHER)|GO:0005634(PANTHER)|GO:0030983(PANTHER)|GO:0033699(PANTHER)|GO:1990165(PANTHER) | |
HCH11g0068 | 758 | MobiDBLite | consensus disorder prediction | 487 | 535 | - | - | |
HCH11g0068 | 758 | MobiDBLite | consensus disorder prediction | 259 | 278 | - | - | |
HCH11g0068 | 758 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 25 | 169 | IPR027417 | - | |
HCH11g0068 | 758 | Gene3D | - | 555 | 736 | IPR036265 | - | |
HCH11g0068 | 758 | Pfam | Scavenger mRNA decapping enzyme C-term binding | 562 | 673 | - | - | |
HCH11g0068 | 758 | ProSitePatterns | HIT domain signature. | 642 | 660 | IPR019808 | - | |
HCH11g0068 | 758 | SUPERFAMILY | HIT-like | 543 | 717 | IPR036265 | - | |
HCH11g0068 | 758 | Pfam | AAA domain | 25 | 152 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0068 | K10863 | - | csv:101216867 | 1172.92 |