Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0084 | ATGGAAGGACACAATCCTCATTCTCATCCCCATATTATTCATCATCATCATCAACAGCAGCAGCAGCAGCAGCTTCTTCATCAAAATATAATTCCTATCAACGTTGATCAAAGTGATAGATTTCCTCAATGGAGTTTACAAGAAACCAAGGAGTTTTTGATGATACGAGCCGAGCTCGATCAAAATTTCATGGAAACCAAACGCAACAAGCCTTTATGGGAACTTACTTCCTCCAAGATGAAGGAAAAGGGATTCAATCGTAGCCCTGAACAGTGTAAATGTAAATGGAAAAATCTCGTTACGCGTTATAAGGGCTGTGAAACAATAGAACCAGAAGTGTTGAGGCAGCAGTTTCCATTCTACACAGAACTGCAAACGATTTTCGCTGCAAGAATGCAAAGGATGCTATGGGCGGAAGCCGAGAGCGGCGCTAGCGGGTCGAAGAAGAAGACGGCGGCATCGATGGCTCTATCGTCGGACGAAGAGGAAGAGAATGAAGATAGCGACGGAGACACGAAAGTTATGAGTAGGAAGAAGAAGAAGAGTAAAAGCGGTGTAGGAGCCGGGGGTAGCGGAAATAGTAGTACAAGTAATCTGAAAGAGATGTTGGAGGAATTCATGAACCAACAAATGCAAATGGAGGTTCAATGGAGGGAAGCATTTGAGGCAAGAGAAAAGGAGAGGCAAATGAAGGAGATGGAATGGAGAAGAAATATGGAGGCATTGGAGCATGAGAGGATAATGATGGAGAGAAGATGGAGAGAGAGAGAGGAGCAAAGGAAGATGAGAGAGGAAGCTAGGGCTGAGAAAAGAGATGCTTTAATCACAGCTTTATTAAACAAGATTAGAAGAGAAGATCATATGTAG | 867 | 43.25 | MEGHNPHSHPHIIHHHHQQQQQQQLLHQNIIPINVDQSDRFPQWSLQETKEFLMIRAELDQNFMETKRNKPLWELTSSKMKEKGFNRSPEQCKCKWKNLVTRYKGCETIEPEVLRQQFPFYTELQTIFAARMQRMLWAEAESGASGSKKKTAASMALSSDEEEENEDSDGDTKVMSRKKKKSKSGVGAGGSGNSSTSNLKEMLEEFMNQQMQMEVQWREAFEAREKERQMKEMEWRRNMEALEHERIMMERRWREREEQRKMREEARAEKRDALITALLNKIRREDHM | 288 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1114038 | 1115178 | - | evm.model.ptg000018l.531 | HCH11g0084 | 553551 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0084 | 288 | MobiDBLite | consensus disorder prediction | 140 | 197 | - | - | |
HCH11g0084 | 288 | FunFam | Zinc finger and SCAN domain-containing 20 | 44 | 105 | - | - | |
HCH11g0084 | 288 | Coils | Coil | 256 | 276 | - | - | |
HCH11g0084 | 288 | CDD | GT1 | 42 | 107 | - | - | |
HCH11g0084 | 288 | ProSiteProfiles | Myb-like domain profile. | 44 | 100 | IPR001005 | - | |
HCH11g0084 | 288 | PANTHER | FI21293P1 | 8 | 284 | - | - | |
HCH11g0084 | 288 | Gene3D | - | 44 | 105 | - | - | |
HCH11g0084 | 288 | Pfam | Myb/SANT-like DNA-binding domain | 43 | 126 | IPR044822 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0084 | HCH-Chr11:1114038 | HCH13g0906 | HCH-Chr13:10625091 | 6.50E-11 | dispersed | |
HCH6g1294 | HCH-Chr6:47163654 | HCH11g0084 | HCH-Chr11:1114038 | 3.30E-23 | transposed | |
HCH11g0084 | HCH-Chr11:1114038 | HCH9g0780 | HCH-Chr9:5359628 | 2.80E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32518 | PF13837 | Myb_DNA-bind_4 | 2.70E-18 | CL0123 | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0084 | - | - | - | 0.0 |