Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0236 ATGGCTGCTCACGTGGAAGAGATTTTACCTCCATCATTGGAAGCCACAGCTGAGCAACCTCCTTTGTTTGATGGCACCACCAGGTTATATACTGCTTATATATGCCCATTTGCACAGCGAGTATGGATCGCCAGGAATTACAAGGGACTACAAGATCAAATCAAGTTGGTTCCTCTCAACCTGCAAAATAGGCCTGATTGGTATAAGGAGAAAGTATACCCTCCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTTATTGGAGAAAGTATTGATCTAATCAAATATGTTGATAGCAATTTTGATGGACCTTCTCTTGTCCCTGATGATCCTGCTAAAAAACAGTTTGGTGAAGAGTTGATATCTTACAGTGATACATTTAATGGAGCAGTGTTCTCTTCGCTTAAAGGAGACATTGCAAAAGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCCCTCCAAAAATTTGATGGCCCATTCTTCCTCGGCGAATTCAGTCTGGCGGATATAACATACATTTCGTTCGTTGAAAGATTGCAAGCTTTCTTATCAGAGGTTTTCAATTATGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGAGCTCAACAAGATTGATGCTTACAAGCAAACAAAAGCTGATCCCAAGATCTTCGTCGAGCTTTACAAGAAGCGTTTCTTGGGTTAA 702 41.17 MAAHVEEILPPSLEATAEQPPLFDGTTRLYTAYICPFAQRVWIARNYKGLQDQIKLVPLNLQNRPDWYKEKVYPPNKVPALEHNGKVIGESIDLIKYVDSNFDGPSLVPDDPAKKQFGEELISYSDTFNGAVFSSLKGDIAKEAGAQFDYLENALQKFDGPFFLGEFSLADITYISFVERLQAFLSEVFNYDITEGRPKLAAWIEELNKIDAYKQTKADPKIFVELYKKRFLG 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2148635 2152019 + evm.model.ptg000018l.379 HCH11g0236 553703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0236 233 CDD GST_C_Lambda 111 228 - -
HCH11g0236 233 SUPERFAMILY GST C-terminal domain-like 102 231 IPR036282 -
HCH11g0236 233 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
HCH11g0236 233 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
HCH11g0236 233 Pfam Glutathione S-transferase, C-terminal domain 143 205 - -
HCH11g0236 233 SFLD Glutathione Transferase (cytosolic) 28 208 IPR040079 -
HCH11g0236 233 FunFam Lambda class glutathione S-transferase 104 233 - -
HCH11g0236 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
HCH11g0236 233 Gene3D - 104 233 - -
HCH11g0236 233 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 232 IPR044629 GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER)
HCH11g0236 233 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
HCH11g0236 233 Gene3D Glutaredoxin 1 103 - -
HCH11g0236 233 SFLD Main (cytGST) 28 208 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0236 HCH-Chr11:2148635 HCH1g0509 HCH-Chr1:53948519 4.80E-89 dispersed
HCH11g0235 HCH-Chr11:2139711 HCH11g0236 HCH-Chr11:2148635 2.20E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0236 K00799 - csv:101211241 404.06