Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0236 | ATGGCTGCTCACGTGGAAGAGATTTTACCTCCATCATTGGAAGCCACAGCTGAGCAACCTCCTTTGTTTGATGGCACCACCAGGTTATATACTGCTTATATATGCCCATTTGCACAGCGAGTATGGATCGCCAGGAATTACAAGGGACTACAAGATCAAATCAAGTTGGTTCCTCTCAACCTGCAAAATAGGCCTGATTGGTATAAGGAGAAAGTATACCCTCCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTTATTGGAGAAAGTATTGATCTAATCAAATATGTTGATAGCAATTTTGATGGACCTTCTCTTGTCCCTGATGATCCTGCTAAAAAACAGTTTGGTGAAGAGTTGATATCTTACAGTGATACATTTAATGGAGCAGTGTTCTCTTCGCTTAAAGGAGACATTGCAAAAGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCCCTCCAAAAATTTGATGGCCCATTCTTCCTCGGCGAATTCAGTCTGGCGGATATAACATACATTTCGTTCGTTGAAAGATTGCAAGCTTTCTTATCAGAGGTTTTCAATTATGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGAGCTCAACAAGATTGATGCTTACAAGCAAACAAAAGCTGATCCCAAGATCTTCGTCGAGCTTTACAAGAAGCGTTTCTTGGGTTAA | 702 | 41.17 | MAAHVEEILPPSLEATAEQPPLFDGTTRLYTAYICPFAQRVWIARNYKGLQDQIKLVPLNLQNRPDWYKEKVYPPNKVPALEHNGKVIGESIDLIKYVDSNFDGPSLVPDDPAKKQFGEELISYSDTFNGAVFSSLKGDIAKEAGAQFDYLENALQKFDGPFFLGEFSLADITYISFVERLQAFLSEVFNYDITEGRPKLAAWIEELNKIDAYKQTKADPKIFVELYKKRFLG | 233 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2148635 | 2152019 | + | evm.model.ptg000018l.379 | HCH11g0236 | 553703 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0236 | 233 | CDD | GST_C_Lambda | 111 | 228 | - | - | |
HCH11g0236 | 233 | SUPERFAMILY | GST C-terminal domain-like | 102 | 231 | IPR036282 | - | |
HCH11g0236 | 233 | Pfam | Glutathione S-transferase, N-terminal domain | 29 | 105 | IPR004045 | - | |
HCH11g0236 | 233 | FunFam | Glutathione S-transferase L2, chloroplastic | 1 | 103 | - | - | |
HCH11g0236 | 233 | Pfam | Glutathione S-transferase, C-terminal domain | 143 | 205 | - | - | |
HCH11g0236 | 233 | SFLD | Glutathione Transferase (cytosolic) | 28 | 208 | IPR040079 | - | |
HCH11g0236 | 233 | FunFam | Lambda class glutathione S-transferase | 104 | 233 | - | - | |
HCH11g0236 | 233 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 25 | 106 | IPR004045 | - | |
HCH11g0236 | 233 | Gene3D | - | 104 | 233 | - | - | |
HCH11g0236 | 233 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 2 | 232 | IPR044629 | GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER) | |
HCH11g0236 | 233 | SUPERFAMILY | Thioredoxin-like | 20 | 107 | IPR036249 | - | |
HCH11g0236 | 233 | Gene3D | Glutaredoxin | 1 | 103 | - | - | |
HCH11g0236 | 233 | SFLD | Main (cytGST) | 28 | 208 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0236 | HCH-Chr11:2148635 | HCH1g0509 | HCH-Chr1:53948519 | 4.80E-89 | dispersed | |
HCH11g0235 | HCH-Chr11:2139711 | HCH11g0236 | HCH-Chr11:2148635 | 2.20E-118 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0236 | K00799 | - | csv:101211241 | 404.06 |