Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0269 ATGTTGAATTTCTTCACATTTCTACTACTTGTCTTCTTTTTTTTCTCCACCAGTGGCATTATCGTAATTACAGTCTCCATTACCGAATTCGATTTCGGCACCGTCGCTGTCAGCAGCTTGAAACTCCTCGGCGACGCTCATTTAAACAACGGCAGCGTAAGACTAACACGTGACCTCGCCGTACCGAATTCTGGAGCCGGTAAAGTTCTTTACGCGCAACCCATCAGATTCCGGAGACCGGATAGCTCTTTTCTTGCGAGTTTCTCCACTTTCTTCTCGTTCTCCATCACAAATCTAAATCCATCTTCCATAGGCGGTGGTCTCGCTTTCCTACTGTCTCCCGACGATACAACGATCGGCGGTGCCGGTGGGTTTTTGGGTCTTGTTGATGAGAGAGGGTTAGGGTTTGTTGCGGTGGAATTCGACACGCTTATGGATGTTGAGTTTAAGGATATTAACGGGAATCATGTCGGGTTGGATCTTAACGGAATGGTTTCGTTGGAAGTTAGTGATTTAGATACCGCCGGAATTGATCTAAAAAGCGGCGATATGGTAAATGCTTGGATTGATTACGACGGCCTCTCTCAGGTTTTGAATATTTTCGTTTCGTATTCGAATTTGAAGCCAAAAAATCCCGTCTTGTCGTTGAATATCGATCTCGATCCGTATTTTAACGATTTCATGTACGTCGGATTTTCGGCTTCGACGCAAGGGAGTACGGAAGTTCATAGTGTGGAATGGTGGAGTTTCCGGTCATCTTTTGACTCGAATTCGCCGCCAGGAGCTTTCCCTCCGCCGCCGACACCGGTGACGAGTACGCTAATGAACCCCACAGCGAATTCGGTGAGATCTCCACCGCCGTCACTGCCACCGACGGATTCTAACCGTTTGTCGGAAAAAGACAGCAAGTCGTCGTCTTGTCATAATGGGCTTTGTAAGGAAGGAGCCGGCGCCGTTGTGGGAGTTGTAACGGCGGGGGCTTTCGTTTTAGCTTTATTCGCCGGAGCTTTGATTTGGGTTTATTCCAAAAAATTCAAACACGTAAAAAAATCGGATCTTTCCCTTGCTTCGGAAATCATCAAAATGCCGAAAGAATTCTCTTACAAAGAACTCAAAACCGCCACTAAATGTTTCAACGGAAACAGAATCATCGGTCACGGCGCTTTCGGGACAGTCTATAAAGGAATCTTACCGGAATCCGGCGACATAGTGGCCGTGAAAAGATGTAGTCATAGCACCCAAGGGAAAAACGAATTCCTATCGGAATTATCGATAATCGGAACTCTCCGTCACCGGAATCTCGTTCGGCTTCAAGGATGGTGTCACGAAAAAGGCGAAAAAGGCGAAATTTTACTCGTTTATGATCTAATGCCAAATGGAAGTCTTGACAAGGCATTATTCGAGGCAAGATCGCCGTTACCGTGGCATCATCGCCGTAAAATTCTCATCGGAATTGCATCGGCATTGGCCTATTTACATCAAGAATGTGAAAACCAAGTGATTCATAGAGATGTAAAAACAAGCAATATAATGTTAGATGAAGGATTCAATGCTAGATTAGGAGATTTTGGATTAGCTAGACAAATTGAGCATGATAAATCTCCGGATGCCACGGTGGCCGCCGGCACAATGGGGTATCTAGCACCGGAGTATCTCTTAACGGGCCGGGCGACGGAGAAAACCGATGTTTTTAGCTACGGCACGGTGGTGTTAGAAGTGGTTACCGGAAGACGGCCAATTGAGAAAGTGAAAAATGTGAATTTGGTTGATTGGGTTTGGAGTTTGCACCGTGAGGGGCGGCTGTTGGCGGCGGCGGATGAGAGGCTCAACGGCGAGTTTGATGAAGGGGAAATGAGGAAAATAATTCTTGTTGGGCTTGTTTGTTCGCACCCGGATCCGATGGTCCGGCCCATTATGAGAAATGTGGTGCAAATGATTATAGGAGAATCCGAAATTCCGGTGGTTCCAAAAACGAAACCTTTGACGAGTTTTAGTACGGCCCATCTTTTACTTACTTTGCAAGATAGTGTGTCGGATTTAAATGATATGATCGCCGGCGAGTCCATGAGTTCGGAATCTGATCGGAGTTTTATAGGCGTTGATTTGATCTCACTTGATGATCCGACGGCTGGGAATTCATCAATCGTATAA 2151 46.12 MLNFFTFLLLVFFFFSTSGIIVITVSITEFDFGTVAVSSLKLLGDAHLNNGSVRLTRDLAVPNSGAGKVLYAQPIRFRRPDSSFLASFSTFFSFSITNLNPSSIGGGLAFLLSPDDTTIGGAGGFLGLVDERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNGMVSLEVSDLDTAGIDLKSGDMVNAWIDYDGLSQVLNIFVSYSNLKPKNPVLSLNIDLDPYFNDFMYVGFSASTQGSTEVHSVEWWSFRSSFDSNSPPGAFPPPPTPVTSTLMNPTANSVRSPPPSLPPTDSNRLSEKDSKSSSCHNGLCKEGAGAVVGVVTAGAFVLALFAGALIWVYSKKFKHVKKSDLSLASEIIKMPKEFSYKELKTATKCFNGNRIIGHGAFGTVYKGILPESGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEKGEILLVYDLMPNGSLDKALFEARSPLPWHHRRKILIGIASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQIEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGTVVLEVVTGRRPIEKVKNVNLVDWVWSLHREGRLLAAADERLNGEFDEGEMRKIILVGLVCSHPDPMVRPIMRNVVQMIIGESEIPVVPKTKPLTSFSTAHLLLTLQDSVSDLNDMIAGESMSSESDRSFIGVDLISLDDPTAGNSSIV 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2444234 2446384 - evm.model.ptg000018l.346 HCH11g0269 553736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0269 716 ProSitePatterns Legume lectins beta-chain signature. 137 143 IPR019825 -
HCH11g0269 716 CDD STKc_IRAK 384 646 - -
HCH11g0269 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH11g0269 716 FunFam L-type lectin-domain containing receptor kinase VIII.1 26 262 - -
HCH11g0269 716 FunFam L-type lectin-domain containing receptor kinase VIII.1 457 664 - -
HCH11g0269 716 MobiDBLite consensus disorder prediction 256 302 - -
HCH11g0269 716 FunFam L-type lectin-domain containing receptor kinase VIII.1 341 456 - -
HCH11g0269 716 CDD lectin_legume_LecRK_Arcelin_ConA 28 254 IPR001220 GO:0030246(InterPro)
HCH11g0269 716 SUPERFAMILY Protein kinase-like (PK-like) 360 670 IPR011009 -
HCH11g0269 716 Gene3D Transferase(Phosphotransferase) domain 1 457 667 - -
HCH11g0269 716 SMART serkin_6 378 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH11g0269 716 Pfam Protein kinase domain 381 587 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH11g0269 716 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 258 IPR013320 -
HCH11g0269 716 PANTHER - 32 661 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
HCH11g0269 716 ProSitePatterns Protein kinases ATP-binding region signature. 384 407 IPR017441 GO:0005524(InterPro)
HCH11g0269 716 Gene3D - 26 260 - -
HCH11g0269 716 Gene3D Phosphorylase Kinase; domain 1 339 455 - -
HCH11g0269 716 Pfam Legume lectin domain 30 256 IPR001220 GO:0030246(InterPro)
HCH11g0269 716 ProSiteProfiles Protein kinase domain profile. 378 655 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0269 HCH-Chr11:2444234 HCH6g0882 HCH-Chr6:43630711 1.80E-171 dispersed
HCH5g0921 HCH-Chr5:7672649 HCH11g0269 HCH-Chr11:2444234 1.20E-74 dispersed
HCH11g0269 HCH-Chr11:2444234 HCH3g0652 HCH-Chr3:4550617 1.10E-96 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81047 PF00069 Pkinase 4.50E-49 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0269 - - - 0.0