Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0306 ATGTTGACATCTACTTCTTCCAACGCCGGCAATGGCTGCTTCGCCTTCCACTTTTTCCTCGGCCGTTGGTTCTCCGTCTTCGCTTCTTTACTTATCATGGCAGTCGCCGGCGCCACCTACATGTTCGGCCTCTACTCTCCCGACATCAAACGGTCCTTAGGCTACGACCAGACAACCTTAAACTTGCTCAGCTTCTCCAAGGACGTAGGGGGAAATGTCGGGATCATCGGGGGATTAATCAACGAGGTAGCGCCGCCGTGGATCGTTCTTCTCATCGGTGCCGCAATGAACTTATTCGGCTACACGATGATATGGCTTGCCGTAACTCACCGGATTCCAAAACCCCAAATATGGCAAATGTGTTTGTATATTTGCATCGGAGCTAATTCTCAAACGTTTGCTAATACGGGAGCTCTTGTTACTTGCGTGAAAAATTTCCCTGAAAGTAGAGGAAGCGTTTTGGGATTGTTGAAGGGATTCGTGGGATTAAGTGGAGCCATTTTGACGCAGATTTATCATGCTCTTTATGGGAATGATTCCAGTTCTCTTATCTTGCTTATTGCTTGGCTTCCGGCCGCCGTCTCCGTCGTGTTTCTTCGATTCGTGAGGATTATTAAGAATTTAGTCCGGCAACCGGTTAATGAGCTTAAGATCTTCTATCATTTACTTTATATTTCACTCTTCCTTGCTGGGTTTCTCATGGTTTTGATTATCTTGCAAAATAGATTCAGATTTCATCAAATGGAGTATATTGCAAGTGCTACGATTGTGCTTCTTTTTCTTCTTCTTCCTTTAGCCGTCGTTTTTCGAGAAGAACTTAGTGTTTGGAAGAGTGTTCATCGTGCAACGGAATTAGAATTATCATCACATTCACAATCACAACCACCTCCACCGCCACCACCTCCGCCGCCGCCGCCGCATGCTGCAAATTCATGCTTTGAAAACGTATTCAAGCCACCAGAAAGAGGCGAGGACTACACTATACTACAAGCAATTTTCAGCATCGACATGATGATTCTCTTCGTGGCGACGATCTGCGGCGTCGGTGGGACATTGACGGCGATCGATAACCTCGGCCAGATCGGAGAATCTTTAGGCTATCCCTCTCGTAGCACCACCACCTTTATCTCTCTAGTAAGTATATGGAACTACCTCGGCCGTGTCGTCTCCGGATTTGCTTCGGAGATTCTATGGAAAAACTACAAAGTTCCACGCCCTCTTTTCTTAGCTCTAACCCTTCTTCTCTCATGCATCGGCCATCTTCTCATCGCTTTCGGATTACCAAATTCTCTCTATTTCGCTTCCATCATCATCGGTTTCTGCTTCGGAGCACAATGGCCGTTGATCTTCGCAATCATATCGGAAATCTTCGGCCTAAAATACTATGCAACTTTGTATAACCTAGGGGGAGCGGCGAGCCCTATCGGAGCTTATATTTTGAACGTGAAAGTCGCCGGATATTTGTACGATAGGGAGGCGATGAGGCAAATGGAGGCTGCGGGACGGAGCCGGAAGGCCGGGGAAGGCTTGACGTGCATCGGCGTGGCGTGTTATAGAATGGCTTTTGTGATTATCACGGCGGTGACTGTGTTTGGATGCTGTGTTTCGTTTATATTGGTGGTACGGACATGGAAGTTTTATAAGGGTGATATTTACAGGAAGTTCAGAGAAGGAGAGGGAGATGAAGAAGGGAAAATGGTGGATCCAAATTGA 1713 46.76 MLTSTSSNAGNGCFAFHFFLGRWFSVFASLLIMAVAGATYMFGLYSPDIKRSLGYDQTTLNLLSFSKDVGGNVGIIGGLINEVAPPWIVLLIGAAMNLFGYTMIWLAVTHRIPKPQIWQMCLYICIGANSQTFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQIYHALYGNDSSSLILLIAWLPAAVSVVFLRFVRIIKNLVRQPVNELKIFYHLLYISLFLAGFLMVLIILQNRFRFHQMEYIASATIVLLFLLLPLAVVFREELSVWKSVHRATELELSSHSQSQPPPPPPPPPPPPHAANSCFENVFKPPERGEDYTILQAIFSIDMMILFVATICGVGGTLTAIDNLGQIGESLGYPSRSTTTFISLVSIWNYLGRVVSGFASEILWKNYKVPRPLFLALTLLLSCIGHLLIAFGLPNSLYFASIIIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGAASPIGAYILNVKVAGYLYDREAMRQMEAAGRSRKAGEGLTCIGVACYRMAFVIITAVTVFGCCVSFILVVRTWKFYKGDIYRKFREGEGDEEGKMVDPN 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2818339 2820051 + evm.model.ptg000018l.309 HCH11g0306 553773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0306 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 556 - GO:0016020(PANTHER)
HCH11g0306 570 SUPERFAMILY MFS general substrate transporter 21 545 IPR036259 -
HCH11g0306 570 MobiDBLite consensus disorder prediction 287 310 - -
HCH11g0306 570 SUPERFAMILY Formin homology 2 domain (FH2 domain) 295 305 - -
HCH11g0306 570 Gene3D MFS general substrate transporter like domains 20 207 IPR036259 -
HCH11g0306 570 Gene3D MFS general substrate transporter like domains 331 546 IPR036259 -
HCH11g0306 570 CDD MFS_Mch1p_like 21 533 - -
HCH11g0306 570 MobiDBLite consensus disorder prediction 292 309 - -
HCH11g0306 570 Pfam Nodulin-like 22 269 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0306 HCH-Chr11:2818339 HCH7g0823 HCH-Chr7:16794824 1.80E-209 dispersed
HCH1g0699 HCH-Chr1:55838358 HCH11g0306 HCH-Chr11:2818339 1.40E-201 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0306 - - - 0.0