Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0341 | ATGGTCGCCGGAAAAGATAAAACCCCAACGGAAACAGACACCACCACCGCGGTCGCCGCCTCCGCCGAGAGACAAAACAAAGCAAGACTAGCTATACTAGAACTCGCGAACATGATAAGTGTTCCTATGTGTCTTAACGCTATCGTGCACCTCAATGTTGCTGATGCCATTTGGCAAGGTGGTTCCAATGATCCACTTTCTGCCGCTGAAATTCTGACACGTGTCCTTCCATCTGGTGGTGATGCTCATAATCTTGAACGGATTCTTCGTATGCTTAGTAGTTATGGTGTGTTCGCGGAGCATCTGATTATGAGCGGGTCTGATTCTGGTCGTAGGTATTCTCTTACTGATGTTGGAAAAACTTTGGTTACTGATTCTGATGGTCTTTCTTATGCGCCCTACGTGCTCCAACACCATCAGGACGCGCTGATGAGAGCGTGGCCAATGGTACACGAGGCGGCGGTGGACGCCACGACGGAGCCGTTCGTGAAAGCGAACGGAGAGGCGGCGTATAATTACTACGGGCAAAAGCCGGAAATGAATGAATTAATGCAGAGAGCGATGTCCGGCGTATCTGTGCCGTTCATGAAGGCGATATTGGACGGCTACGATGGGTTTAAAGGAGTAGAGAAATTGGTAGATGTGGGAGGGAGTGCAGGGGATTGCCTGCGGATGATTCTACAGAAACATTCTCATATTAAAGAAGGGATTAATTTTGATCTCCCTGAGGTTGTGGCCAAGGCACCCACCATTCATGGGGTGACCCACGTGGGAGGCGACATGTTCAAATCCATTCCCAGGGGTGATGCTATTTTCATGAAGTGGGTTTTGTCAACATGGACGGACGATGAATGCAAGATTATATTGGAAAACTGCTGCAACTCTCTCCCGGCCGGTGGAAAACTGATCGCCTGTGAGCCAACCCTGCCGGAGAAAACGGACGACAGTCACCGGACACGCGCCCTTTTAGCTAATGACATATTTATCATGACGATCTATAAAGCAAAAAGTAAGCAGAGAATGGAGGAGCAGTTCCGGCAGCTCGGTGTCGCTGCCGGATTCTCCACCCTCCGAGCATTACATATTGATTACTTCTATTGTTTGTTGGAATTCCAAAAGTGA | 1122 | 49.02 | MVAGKDKTPTETDTTTAVAASAERQNKARLAILELANMISVPMCLNAIVHLNVADAIWQGGSNDPLSAAEILTRVLPSGGDAHNLERILRMLSSYGVFAEHLIMSGSDSGRRYSLTDVGKTLVTDSDGLSYAPYVLQHHQDALMRAWPMVHEAAVDATTEPFVKANGEAAYNYYGQKPEMNELMQRAMSGVSVPFMKAILDGYDGFKGVEKLVDVGGSAGDCLRMILQKHSHIKEGINFDLPEVVAKAPTIHGVTHVGGDMFKSIPRGDAIFMKWVLSTWTDDECKIILENCCNSLPAGGKLIACEPTLPEKTDDSHRTRALLANDIFIMTIYKAKSKQRMEEQFRQLGVAAGFSTLRALHIDYFYCLLEFQK | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3184121 | 3188444 | - | evm.model.ptg000018l.274 | HCH11g0341 | 553808 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0341 | 373 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 127 | 371 | IPR029063 | - | |
HCH11g0341 | 373 | PIRSF | O-mtase | 10 | 373 | IPR016461 | GO:0008168(InterPro) | |
HCH11g0341 | 373 | PANTHER | O-METHYLTRANSFERASE | 35 | 355 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
HCH11g0341 | 373 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
HCH11g0341 | 373 | SUPERFAMILY | Winged helix DNA-binding domain | 26 | 127 | IPR036390 | - | |
HCH11g0341 | 373 | Gene3D | - | 13 | 127 | IPR036388 | - | |
HCH11g0341 | 373 | Gene3D | Vaccinia Virus protein VP39 | 128 | 373 | IPR029063 | - | |
HCH11g0341 | 373 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 33 | 373 | IPR016461 | GO:0008168(InterPro) | |
HCH11g0341 | 373 | Pfam | O-methyltransferase domain | 153 | 355 | IPR001077 | GO:0008171(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0341 | HCH-Chr11:3184121 | HCH11g1355 | HCH-Chr11:45377376 | 1.20E-57 | dispersed | |
HCH11g0341 | HCH-Chr11:3184121 | HCH2g0700 | HCH-Chr2:50786822 | 4.30E-31 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0341 | - | - | - | 0.0 |