Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0364 ATGGAGCTTGAAGTTGCAACCTTTGTTATATTGCTATTCTTGTGGCCTCTATGGGCAGCAGCCGCCACCATGTGGCGGCGATGCCGTCTAGTGGAGGAGACGGGGAAGCTTCCACCGGGGCCGCCATGTTGGCCGGTGGTCGGAAACATGTTCCAACTCAGTCTGGCTTCTCACAAGTCATTTACCGAGTTGGCTCAAAAGCATGGCCCCATCATGACTCTCCGGTTAGGCTTCATGAGCACCGTCGTGATCTCGTCGAGCGAGGCGGCGCGTTATATGTTCAAAAATCACGACGTGGTTCTCGCAGGCCGAAAGATTTACGAGGCAATGAAGGGGGATGACGGAACCGACGGCTCACTCATCGCCTCCCAGTACGGCCCACACTGGCGCATGCTCCGGAAACTTAGCACGACGGAGTTTTTCACCACTCGTCGTCTCGATGCCCTGCGCTCTGTCCGCAGCCGGTGCATCGACACCATGGTGCGGTTCGTGGAAGACTCGGGCGGGGCCGGAAAGAACCCAGTCGACGTCGGAAAATTCTTTTTCTTAATGGGATTCAATCTGATCGGAAACCTAATATTTTCAAAAGATCTTTTGAACCCAAATTCAAAGAGGGGATCAGAATTCTATTACCATACCCGAAAGGTGATGGAACTGGTCGGAAAGCCGAACGTAGCGGATTTCTTTCCGGTTTTCCGGTGGTTTGATTTACAAGGGCTTAGGAGGAAGACCCAGTTTCATATTAATAAAGCTTTTGATATCACCGGAGATTTTATACGAGAAAGATTAATGGAGAAAGAGAAGGAGAAAAAGGATTTTTTGGATGTTTTATTGGAGTTTCGTGGAGATGGCGTGGAAGAGCCCTCTAGTTTCTCTTCACGAATCATCAACGTTATCGTCTTCGAGATGTTCACGGCGGGGACAGACACAACAACCAGCACATTAGAGTGGGCGATGGCGGAGCTCCTCCGAAACCCGGCGGCGCTAAAGAAAGTCCAGTTAGAATTAAGAAACACAATCGGTTCCGGCGAGAAACTAGAAGAAAAACATCTCACAAATCTCCCTTACCTAAACGCCATCATCAAAGAAACCCTAAGACTTCACCCACCACTTCCCTTTCTAGTCCCACACATGGCCATGGAATCATGTCAAATGCTAGGTTATCACATTCCTAAAGAAACTCAAATCTTAGTCAATGTTTGGGCCATTGGTCGAGATTCCAAAACGTGGGAAAACCCTTTGGTTTTCAGGCCGGAGAGGTTTTTGGAACAAGAGAAGGATTATAGAGGACAGCATTTTGAGTTTATACCTTTTGGTTCGGGCCGTCGTATGTGTCCAGCAGTTCCGTTAGCGTCTCGGGTTCTTCCGATGGCTCTCGGGTCGCTCTTGCTCTTGTTTGATTGGCTTTTGCCTGACGGAGGTAAGCCGGAGGACTTGGATATGTCGGAGAGAATGGGGATAACTCTAAGGAAAGCTGTCCCTTTGAAGGCAATTCCTTTACCTTATAAACCTTATTGTTTCAATTAG 1527 48.66 MELEVATFVILLFLWPLWAAAATMWRRCRLVEETGKLPPGPPCWPVVGNMFQLSLASHKSFTELAQKHGPIMTLRLGFMSTVVISSSEAARYMFKNHDVVLAGRKIYEAMKGDDGTDGSLIASQYGPHWRMLRKLSTTEFFTTRRLDALRSVRSRCIDTMVRFVEDSGGAGKNPVDVGKFFFLMGFNLIGNLIFSKDLLNPNSKRGSEFYYHTRKVMELVGKPNVADFFPVFRWFDLQGLRRKTQFHINKAFDITGDFIRERLMEKEKEKKDFLDVLLEFRGDGVEEPSSFSSRIINVIVFEMFTAGTDTTTSTLEWAMAELLRNPAALKKVQLELRNTIGSGEKLEEKHLTNLPYLNAIIKETLRLHPPLPFLVPHMAMESCQMLGYHIPKETQILVNVWAIGRDSKTWENPLVFRPERFLEQEKDYRGQHFEFIPFGSGRRMCPAVPLASRVLPMALGSLLLLFDWLLPDGGKPEDLDMSERMGITLRKAVPLKAIPLPYKPYCFN 508
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 3423694 3426683 + evm.model.ptg000018l.251 HCH11g0364 553831
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0364 508 FunFam Cytochrome P450 76C4 29 498 - -
HCH11g0364 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH11g0364 508 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 CDD CYP76-like 65 499 - -
HCH11g0364 508 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 502 - -
HCH11g0364 508 Gene3D Cytochrome P450 27 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0364 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0364 HCH-Chr11:3423694 HCH5g0450 HCH-Chr5:3024221 1.70E-107 dispersed
HCH11g0364 HCH-Chr11:3423694 HCH11g0365 HCH-Chr11:3428514 8.70E-176 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0364 - - - 0.0