Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH11g0364 | ATGGAGCTTGAAGTTGCAACCTTTGTTATATTGCTATTCTTGTGGCCTCTATGGGCAGCAGCCGCCACCATGTGGCGGCGATGCCGTCTAGTGGAGGAGACGGGGAAGCTTCCACCGGGGCCGCCATGTTGGCCGGTGGTCGGAAACATGTTCCAACTCAGTCTGGCTTCTCACAAGTCATTTACCGAGTTGGCTCAAAAGCATGGCCCCATCATGACTCTCCGGTTAGGCTTCATGAGCACCGTCGTGATCTCGTCGAGCGAGGCGGCGCGTTATATGTTCAAAAATCACGACGTGGTTCTCGCAGGCCGAAAGATTTACGAGGCAATGAAGGGGGATGACGGAACCGACGGCTCACTCATCGCCTCCCAGTACGGCCCACACTGGCGCATGCTCCGGAAACTTAGCACGACGGAGTTTTTCACCACTCGTCGTCTCGATGCCCTGCGCTCTGTCCGCAGCCGGTGCATCGACACCATGGTGCGGTTCGTGGAAGACTCGGGCGGGGCCGGAAAGAACCCAGTCGACGTCGGAAAATTCTTTTTCTTAATGGGATTCAATCTGATCGGAAACCTAATATTTTCAAAAGATCTTTTGAACCCAAATTCAAAGAGGGGATCAGAATTCTATTACCATACCCGAAAGGTGATGGAACTGGTCGGAAAGCCGAACGTAGCGGATTTCTTTCCGGTTTTCCGGTGGTTTGATTTACAAGGGCTTAGGAGGAAGACCCAGTTTCATATTAATAAAGCTTTTGATATCACCGGAGATTTTATACGAGAAAGATTAATGGAGAAAGAGAAGGAGAAAAAGGATTTTTTGGATGTTTTATTGGAGTTTCGTGGAGATGGCGTGGAAGAGCCCTCTAGTTTCTCTTCACGAATCATCAACGTTATCGTCTTCGAGATGTTCACGGCGGGGACAGACACAACAACCAGCACATTAGAGTGGGCGATGGCGGAGCTCCTCCGAAACCCGGCGGCGCTAAAGAAAGTCCAGTTAGAATTAAGAAACACAATCGGTTCCGGCGAGAAACTAGAAGAAAAACATCTCACAAATCTCCCTTACCTAAACGCCATCATCAAAGAAACCCTAAGACTTCACCCACCACTTCCCTTTCTAGTCCCACACATGGCCATGGAATCATGTCAAATGCTAGGTTATCACATTCCTAAAGAAACTCAAATCTTAGTCAATGTTTGGGCCATTGGTCGAGATTCCAAAACGTGGGAAAACCCTTTGGTTTTCAGGCCGGAGAGGTTTTTGGAACAAGAGAAGGATTATAGAGGACAGCATTTTGAGTTTATACCTTTTGGTTCGGGCCGTCGTATGTGTCCAGCAGTTCCGTTAGCGTCTCGGGTTCTTCCGATGGCTCTCGGGTCGCTCTTGCTCTTGTTTGATTGGCTTTTGCCTGACGGAGGTAAGCCGGAGGACTTGGATATGTCGGAGAGAATGGGGATAACTCTAAGGAAAGCTGTCCCTTTGAAGGCAATTCCTTTACCTTATAAACCTTATTGTTTCAATTAG | 1527 | 48.66 | MELEVATFVILLFLWPLWAAAATMWRRCRLVEETGKLPPGPPCWPVVGNMFQLSLASHKSFTELAQKHGPIMTLRLGFMSTVVISSSEAARYMFKNHDVVLAGRKIYEAMKGDDGTDGSLIASQYGPHWRMLRKLSTTEFFTTRRLDALRSVRSRCIDTMVRFVEDSGGAGKNPVDVGKFFFLMGFNLIGNLIFSKDLLNPNSKRGSEFYYHTRKVMELVGKPNVADFFPVFRWFDLQGLRRKTQFHINKAFDITGDFIRERLMEKEKEKKDFLDVLLEFRGDGVEEPSSFSSRIINVIVFEMFTAGTDTTTSTLEWAMAELLRNPAALKKVQLELRNTIGSGEKLEEKHLTNLPYLNAIIKETLRLHPPLPFLVPHMAMESCQMLGYHIPKETQILVNVWAIGRDSKTWENPLVFRPERFLEQEKDYRGQHFEFIPFGSGRRMCPAVPLASRVLPMALGSLLLLFDWLLPDGGKPEDLDMSERMGITLRKAVPLKAIPLPYKPYCFN | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 3423694 | 3426683 | + | evm.model.ptg000018l.251 | HCH11g0364 | 553831 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH11g0364 | 508 | FunFam | Cytochrome P450 76C4 | 29 | 498 | - | - | |
| HCH11g0364 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH11g0364 | 508 | Pfam | Cytochrome P450 | 38 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | SUPERFAMILY | Cytochrome P450 | 38 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | CDD | CYP76-like | 65 | 499 | - | - | |
| HCH11g0364 | 508 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 8 | 502 | - | - | |
| HCH11g0364 | 508 | Gene3D | Cytochrome P450 | 27 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0364 | 508 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g0364 | HCH-Chr11:3423694 | HCH5g0450 | HCH-Chr5:3024221 | 1.70E-107 | dispersed | |
| HCH11g0364 | HCH-Chr11:3423694 | HCH11g0365 | HCH-Chr11:3428514 | 8.70E-176 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH11g0364 | - | - | - | 0.0 |