Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH11g0365 | ATGGAATACAAATTCTTAGGATATCTCATCGCCATCCTATGTCTATGGTTTGCTCGAAAATTAATATCTTTACAACACAACACGTCAAAACGCCGGCAACTTCCTCCGGGACCGAGAAAATGGCCAGTGATCGGAAACTTACTCCATCTCCGACCATCCGCCCATTCCTGTTTCACAGAACTAGCTCAAAAACACGGACCCATCATGACAATCTGGCTCGGCTCCATGCCCACAATCGTAATTTCCTCCATGGAAGCAGCACGCCACGTGTACAAATTCCATGACACGGCTGTCGCCGGCCGGAAACTCAACGACGCAATGAGTTCAGATTTCGGCACCGAAGGTTCCATCGCCGCTTCACAATACGGGCAGCACTGGAGGCTTCTCAGGCGGCTTTGCACAACGGAGTTTTTCGTCAAACGCCGTCTCGACGCCATGGAATCCGTCCGTTCGAAATGCATCAATGATCTCGTGAAACTCGTGAGAGAATCAGTAGCTGAGACAGATTCAGGCGCCGGCATTGACTTAAGGAGATTTTTCTTTCTGATGAATTTTAATTTGATCGGGAATTTGATGTTTTCGAAAGATTTATTGGGTCCGGCGTCGGAAAAAGGGAAGTCGTTTTTTTACCATGCGGAGAAAGTGGCGGAATGGGCCGGGAAGCCCAATGTGGTGGATTTTTGGCCCGTTTTGAAACGGGTTGACCCGCAAAGAATTAAGAGGAATACTCAATTTCATATTAGAAAAGCGTTTGAAATTGCTGGAGATTTTATTAAAGAGAGAATGGAAGAGGTGGAAAATGGACGACATGTCGGAGATGGGAATAGAAAGGATTATTTGGATGTTTTGTTGGAGTTTCGTGGGGATGGTCTTAGTGAGCCGACAAGATTCTCTATTAGAACTATTAACGTCTCAATTTTCGAGATGTTCATGACGGGGACTGAGACGACCACCAGTACAATGGAGTGGGTGATGGCGGAGCTCCTCCGCAACCGGCCTGCACTCGAAAAAGTGCAGGCGGAGCTAAGGAGCAAGCTAGGCGAAAGCAGCAACAAGGTTAAAGAAAACGACTTAGAAAATCTACCATTTCTCAGGGCTGTTATCAAAGAAACTCTAAGACTTCACCCACCACTTCCCTTCATGTTCCCCCATAAAGCCATGGAAACTTTTGAGTTGATGGGCTTTAACGTGCCCAAAGAGACCCAAATTCTGTTTAATGTTTGGGCCATTGGACGAGACCCAAGGAATTGGGAAAGCCCATTAGAGTTTAGGCCCGAAAGGTTTTTGGGCCCTGATGAAATTGATTTTAAAGGGCAGCATTTTACCTTTTTGCCCTTTGGATCAGGGAGAAGGATGTGTCCAGCTATACCCCTTGTGTCTAGGACACTTCCATTGGCTCTTGGATCTCTCTTGTTTTTGTTTGATTGGGCCTTGGAAGATGGGCTTGAGCCCAATAATATGGACATGACTGAAAGGTTGGGGATAACACTTAAGAAGTCCGCACCTTTAAAAGTTAAACCAATTCCTTATAAAGGAGTTTTCAAGCAATAG | 1551 | 45.84 | MEYKFLGYLIAILCLWFARKLISLQHNTSKRRQLPPGPRKWPVIGNLLHLRPSAHSCFTELAQKHGPIMTIWLGSMPTIVISSMEAARHVYKFHDTAVAGRKLNDAMSSDFGTEGSIAASQYGQHWRLLRRLCTTEFFVKRRLDAMESVRSKCINDLVKLVRESVAETDSGAGIDLRRFFFLMNFNLIGNLMFSKDLLGPASEKGKSFFYHAEKVAEWAGKPNVVDFWPVLKRVDPQRIKRNTQFHIRKAFEIAGDFIKERMEEVENGRHVGDGNRKDYLDVLLEFRGDGLSEPTRFSIRTINVSIFEMFMTGTETTTSTMEWVMAELLRNRPALEKVQAELRSKLGESSNKVKENDLENLPFLRAVIKETLRLHPPLPFMFPHKAMETFELMGFNVPKETQILFNVWAIGRDPRNWESPLEFRPERFLGPDEIDFKGQHFTFLPFGSGRRMCPAIPLVSRTLPLALGSLLFLFDWALEDGLEPNNMDMTERLGITLKKSAPLKVKPIPYKGVFKQ | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 3428514 | 3430498 | + | evm.model.ptg000018l.250 | HCH11g0365 | 553832 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH11g0365 | 516 | Pfam | Cytochrome P450 | 35 | 498 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | P450 superfamily signature | 444 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | SUPERFAMILY | Cytochrome P450 | 35 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | E-class P450 group I signature | 453 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | E-class P450 group I signature | 443 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0365 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 446 | 455 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH11g0365 | 516 | CDD | CYP76-like | 62 | 507 | - | - | |
| HCH11g0365 | 516 | FunFam | Cytochrome P450 76C4 | 26 | 506 | - | - | |
| HCH11g0365 | 516 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 10 | 510 | - | - | |
| HCH11g0365 | 516 | Gene3D | Cytochrome P450 | 20 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g0365 | HCH-Chr11:3428514 | HCH5g0450 | HCH-Chr5:3024221 | 3.90E-99 | dispersed | |
| HCH11g0364 | HCH-Chr11:3423694 | HCH11g0365 | HCH-Chr11:3428514 | 8.70E-176 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH11g0365 | - | - | - | 0.0 |