Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0395 ATGGATACCAAGATCATGTTGTTGAAAGCTTTTTTTTCTTTCATTTTGATTCTTTCCTCAGCTATTTCTTCATCTTACAGTTCAAGCCAACATGACAGAAAGGCATATATTGTGTACATGGGAGCAGTGCCAAATGTGGGAATCCATGTTCTTGAAGATCATCATCACAGCCTTCTTGCCAAGGCAATTGGAGATGAGAAAATAGCTAGAAAATCAAAGATACATAGCTATGGGAGGAGCTTCAATGGGTTTGCTGCAAAACTCCTACCCCATGAAGCCAAGAAACTAGCAAAGGAAAAGAATGTGGTGTCAGTGTTTGAAAGCAAACTAAGGAAGATGCATACTACAAGATCATGGGATTTTATAGGATTTTCCGAAACAAAGAGTAAACAAAATTCAGGTGCAGAGAGCAACATAATAATTGGTTTATTGGATTCTGGAATTTGGATGGATTCTCCAAGTTTCAATGATCATAGCTATGGTCCAATCCCTTCTACATGGAAAGGCAGATGTGATACTGGCCCCAACTTCACCTCCTGCAACAGGAAAGTGATCGGTGCAATGTTCTTCAATCTGGAAAATATCGATCACGGCGCCAACCACAGTCCTGCCGACGACATCGGCCACGGAACCCACACGGCCTCCACCGCTGCTGGAAACTCCATCCGAGGTGCCAGCTTCTACGGTATTGCCAAGGGCACTGCTCGTGGCGGTGTTCCTAACGCCCGTATCGCCATGTACAAAGTTTGCTGGCCTGTAGGTTGCACGGACATAGATATCTTGGCTGGATTCGACCACGCTATCGCCGACGGTGTCGATGTGATATCGGTGTCTCTCGGTGGAGAGTCGATCGAGTTTTTCGAGGATCCGATTGCGATAGGATCTTTTCATGCAATGCAGAAGGGGATATTAACATCTTGCTCAGGAGGGAATAGTGGACCTTATTTAGAATCAGTGCAAAATGTGGCTCCATGGGTCATGACCATTGCTGCAAGTTCCATTGATAGAGGGTTTAGTACTATTGCTAAGTTGGGTAACAATAAAACGTTTTCTGGAATCTCAATCAATACATTTACTCCGAAGAAGAAAATGTACCCTCTTATCAGTGGAGCCAAGGCAGCAGCAAACTCCAGCAATGATGATGGCTTTTTGGTTCCAAGTTACTGTGATCCTGGGACTCTGGATAAGAAGAAGGTGAAAGGGAAGATTGTGTATTGTTTGGGACTATATGGTCAAGAAGTGACCATTGGAGAATTGGGAGGGGTTGGTTTGATCGCTAATATTCAAGGGAAAACAGATATTGCTTCAACCACTCCCATGCCTTCCACCTATCTTTCTACTAAAGATGGAGACTCGGTTGATCGCTATATCAACTCGACCGAGAAACCTAAAGCTGTGATCTTCAAAACAACTACTTACAAGAGTGATGCCCCTTTCCTTGCTCTTTTTTCTTCCAGAGGTCCACAAACTATAACTCCTGAAATCCTCAAGCCTGATATTGCAGCTCCAGGGTTAGATATATTAGCAGCTTACTCAAAACTGACTCCAGTATACAGCAACCGTTACAGCATCTTCAACATTTTATCTGGAACCTCCATGGCTTGTCCTCACGCCGCGGCTGCCGCAGCCTACGTCAAGACCTTCCATCCCAGATGGTCACCAGCAGCCATTAAATCTGCCCTAATGACCACAGCGACACCGGTGAAGACCGAAGAAGATTTCGATCAACTTGGGACCGGAGCCGGACAAATAAACCCTATCAGAGCTGTCCACCCCGGCCTCATTTATGACCTTTCTCTAGACTCATACATAGCTTTCCTTTGTGCGAAAAAGAGTTACAGCGGCACCGTCCTCGGCATCCTCATCGGAGAATCCAATGAATATAACTGCTCCTCCGTGAAGCCAGCAAAAGGCTCTGACTCCCTCAACTACCCTACCATGTATATACCGTTAGGCAAAAACAAAACTTCCATCGCCGCTGTCTTCTACCGGACGGTGACCCATGTCGGGTTCGGCAGTTCGGTGTACAAAGCAAAAGTGAAGTCTCCGGCAAATATGACGGTGAAAGTCATTCCGAACACTCTAAAATTTGACCGGGCGTATCTGCAGCGGTCGTTTAAGGTTGTGGTGAAAGGTGGTGTGATGCGAGACGAGGATAAGATTCTGTCAGCTTCACTTGAGTGGGATGATTCTAAGCATAATGTTAGAAGCCAAATCATAGTGTTTAAACATGAATAA 2238 45.22 MDTKIMLLKAFFSFILILSSAISSSYSSSQHDRKAYIVYMGAVPNVGIHVLEDHHHSLLAKAIGDEKIARKSKIHSYGRSFNGFAAKLLPHEAKKLAKEKNVVSVFESKLRKMHTTRSWDFIGFSETKSKQNSGAESNIIIGLLDSGIWMDSPSFNDHSYGPIPSTWKGRCDTGPNFTSCNRKVIGAMFFNLENIDHGANHSPADDIGHGTHTASTAAGNSIRGASFYGIAKGTARGGVPNARIAMYKVCWPVGCTDIDILAGFDHAIADGVDVISVSLGGESIEFFEDPIAIGSFHAMQKGILTSCSGGNSGPYLESVQNVAPWVMTIAASSIDRGFSTIAKLGNNKTFSGISINTFTPKKKMYPLISGAKAAANSSNDDGFLVPSYCDPGTLDKKKVKGKIVYCLGLYGQEVTIGELGGVGLIANIQGKTDIASTTPMPSTYLSTKDGDSVDRYINSTEKPKAVIFKTTTYKSDAPFLALFSSRGPQTITPEILKPDIAAPGLDILAAYSKLTPVYSNRYSIFNILSGTSMACPHAAAAAAYVKTFHPRWSPAAIKSALMTTATPVKTEEDFDQLGTGAGQINPIRAVHPGLIYDLSLDSYIAFLCAKKSYSGTVLGILIGESNEYNCSSVKPAKGSDSLNYPTMYIPLGKNKTSIAAVFYRTVTHVGFGSSVYKAKVKSPANMTVKVIPNTLKFDRAYLQRSFKVVVKGGVMRDEDKILSASLEWDDSKHNVRSQIIVFKHE 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3878362 3882331 - evm.model.ptg000018l.220 HCH11g0395 553862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0395 745 ProSiteProfiles Serine proteases, subtilase domain profile. 118 590 - -
HCH11g0395 745 Gene3D Peptidase S8/S53 domain 138 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH11g0395 745 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 141 151 IPR023827 -
HCH11g0395 745 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 114 IPR037045 -
HCH11g0395 745 CDD Peptidases_S8_3 112 566 IPR034197 -
HCH11g0395 745 SUPERFAMILY Subtilisin-like 113 594 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH11g0395 745 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
HCH11g0395 745 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
HCH11g0395 745 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
HCH11g0395 745 Pfam Fibronectin type-III domain 642 741 IPR041469 -
HCH11g0395 745 Pfam Subtilase family 137 579 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH11g0395 745 Pfam Peptidase inhibitor I9 36 114 IPR010259 -
HCH11g0395 745 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 739 IPR045051 -
HCH11g0395 745 CDD PA_subtilisin_like 343 467 - -
HCH11g0395 745 Gene3D - 607 743 - -
HCH11g0395 745 FunFam Subtilisin-like protease SBT1.5 138 351 - -
HCH11g0395 745 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
HCH11g0395 745 Gene3D - 335 473 - -
HCH11g0395 745 FunFam Subtilisin-like protease SBT5.3 24 114 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0395 HCH-Chr11:3878362 HCH1g0421 HCH-Chr1:52423896 2.10E-162 dispersed
HCH12g1571 HCH-Chr12:42335896 HCH11g0395 HCH-Chr11:3878362 3.10E-174 transposed
HCH11g0395 HCH-Chr11:3878362 HCH9g0505 HCH-Chr9:3217585 3.00E-241 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0395 - - - 0.0