Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH11g0586 | ATGGCAAATATATTTGCGAAAGACGCACCATTCTATCAGTTTTTCTTCTTCTGGTTCATCACTGCCCTTCTCGTTCATCTCTTGGTTAAAAAATATATTCTAAAACAGAAGTCTTCGTCATCCAAAGGTCCACTGAGCCCTCCAGGCTTGCCTCTCATCGGCCATCTCCATCTCATCAGCCCAGTTCTGTTTACAAGCCTCCAGAGCCTATCTCGCCTCTATGGCCCGCTCATTCAGCTTCGATTGGGAGCGTCAACGTGTGTCCTGGCTTCAAATGCCGTTGTTGCCAAAGAAATTTTCAAAACCAACGAGCAAAACTTCCTGTCCCGGCCTGAATTTGGTTCCTCAGAGTTCTTCATCTATAGAGGGTCGAGATTTATCCTAGCCAAATATGGTGCCTACTGGCGGTTCATGAAGAAACTCACCATGACAAGGCTACTTTCGACGCCACAACTCGCCCTTTTTTCCGATATCCGCCACGATGAGGTTGCAAAGCTTGTGGACAGAATTGGAATGAATTCAAGGGAAGGGAAGCCTTCGGATTTAAGCTTCGAATCGACAACTCTGAATAACAATATCATATGTAGGATGGCTTTCGGTACAAGGTGCACTGGGGGAGCGGATGAAGCTCAAGAAATCAAGGAGTTGGTATCGGAAATTAATAGGCTGGCAGGGAGGCTAGGCGTCGGGGATATTTTAGGTCCTCTAAAGATGTTTGATTTCTCCGGTAATCGAAGGAAGTTTGTGGCGAGTTTGGAAAGGTTTGATCAGTTGGTGGAGAGGATAATGAAAGAACATGAAGAGAAGGCCATGGATGTGGATAAAAAGAAAGATATGTTGGATATCTTGCTGGAGATTTACACAGATCCAGCTGCTGAAATGAAAATAACCAGAAAAGATATCAAGTCCTTCTTGCTTGACATTTTCATGGCCGGCACCGACACAACATCAGCAGCAGTTCAATGGGCCATGGGAGAGCTACTGAACCGTCCAGAAGCATTTCAAAAGCTGAGAGAAGAGATTATTACTGTTGTCGGAAACGACAGGCTTGTCAAAGAATCTGACTTCCCAAATCTCCCATATCTTCAGGCAGTCACTAAAGAAACTCTTCGACTCCACCCATCGGCACCGTTGATCATCCGGGAATGTGCCGATGACTGTAACATCAATGGCTCATTAGTGAAGGCAAAAACTCGAGTCCTAGTCAATGCATACGCCGTAATGCGGGACCCAGATTCCTGGTCGGACCCCGACAAGTTTATGCCGGAGAGGTTCCTTGAAGGCTCGACGGAGAATATCGGTGAACACCAGATGGAAATAAAAGGACAGAATTTCCGGTTTATTCCGTTTGGGAGTGGGAAGAGAGGATGTCCGGGTGCTTCACTCGCCATGTTGGTGTTGCCTTGTGCAGTTGCAGCCTTGGTGCAACGGTTTGATTGGAAAGTGAAAGATGGAAATGATGGTGTCGATTTGAGTCCTGGAACCGGGTTTGTCCCTGAAATGGCGACGCCGATTGTTCGTTACGCAGACGCCATCAGTACTTGA | 1545 | 46.67 | MANIFAKDAPFYQFFFFWFITALLVHLLVKKYILKQKSSSSKGPLSPPGLPLIGHLHLISPVLFTSLQSLSRLYGPLIQLRLGASTCVLASNAVVAKEIFKTNEQNFLSRPEFGSSEFFIYRGSRFILAKYGAYWRFMKKLTMTRLLSTPQLALFSDIRHDEVAKLVDRIGMNSREGKPSDLSFESTTLNNNIICRMAFGTRCTGGADEAQEIKELVSEINRLAGRLGVGDILGPLKMFDFSGNRRKFVASLERFDQLVERIMKEHEEKAMDVDKKKDMLDILLEIYTDPAAEMKITRKDIKSFLLDIFMAGTDTTSAAVQWAMGELLNRPEAFQKLREEIITVVGNDRLVKESDFPNLPYLQAVTKETLRLHPSAPLIIRECADDCNINGSLVKAKTRVLVNAYAVMRDPDSWSDPDKFMPERFLEGSTENIGEHQMEIKGQNFRFIPFGSGKRGCPGASLAMLVLPCAVAALVQRFDWKVKDGNDGVDLSPGTGFVPEMATPIVRYADAIST | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 11243630 | 11246454 | + | evm.model.ptg000018l.29 | HCH11g0586 | 554053 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 189 | 207 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 71 | 90 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 95 | 116 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | Gene3D | Cytochrome P450 | 36 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | Pfam | Cytochrome P450 | 44 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 23 | 504 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| HCH11g0586 | 514 | SUPERFAMILY | Cytochrome P450 | 40 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0586 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH11g0586 | 514 | FunFam | Cytochrome P450 family protein | 35 | 507 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g0586 | HCH-Chr11:11243630 | HCH4g1171 | HCH-Chr4:7861537 | 4.30E-114 | dispersed | |
| HCH11g0586 | HCH-Chr11:11243630 | HCH9g1132 | HCH-Chr9:14652877 | 1.10E-114 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH11g0586 | - | - | - | 0.0 |