Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0586 ATGGCAAATATATTTGCGAAAGACGCACCATTCTATCAGTTTTTCTTCTTCTGGTTCATCACTGCCCTTCTCGTTCATCTCTTGGTTAAAAAATATATTCTAAAACAGAAGTCTTCGTCATCCAAAGGTCCACTGAGCCCTCCAGGCTTGCCTCTCATCGGCCATCTCCATCTCATCAGCCCAGTTCTGTTTACAAGCCTCCAGAGCCTATCTCGCCTCTATGGCCCGCTCATTCAGCTTCGATTGGGAGCGTCAACGTGTGTCCTGGCTTCAAATGCCGTTGTTGCCAAAGAAATTTTCAAAACCAACGAGCAAAACTTCCTGTCCCGGCCTGAATTTGGTTCCTCAGAGTTCTTCATCTATAGAGGGTCGAGATTTATCCTAGCCAAATATGGTGCCTACTGGCGGTTCATGAAGAAACTCACCATGACAAGGCTACTTTCGACGCCACAACTCGCCCTTTTTTCCGATATCCGCCACGATGAGGTTGCAAAGCTTGTGGACAGAATTGGAATGAATTCAAGGGAAGGGAAGCCTTCGGATTTAAGCTTCGAATCGACAACTCTGAATAACAATATCATATGTAGGATGGCTTTCGGTACAAGGTGCACTGGGGGAGCGGATGAAGCTCAAGAAATCAAGGAGTTGGTATCGGAAATTAATAGGCTGGCAGGGAGGCTAGGCGTCGGGGATATTTTAGGTCCTCTAAAGATGTTTGATTTCTCCGGTAATCGAAGGAAGTTTGTGGCGAGTTTGGAAAGGTTTGATCAGTTGGTGGAGAGGATAATGAAAGAACATGAAGAGAAGGCCATGGATGTGGATAAAAAGAAAGATATGTTGGATATCTTGCTGGAGATTTACACAGATCCAGCTGCTGAAATGAAAATAACCAGAAAAGATATCAAGTCCTTCTTGCTTGACATTTTCATGGCCGGCACCGACACAACATCAGCAGCAGTTCAATGGGCCATGGGAGAGCTACTGAACCGTCCAGAAGCATTTCAAAAGCTGAGAGAAGAGATTATTACTGTTGTCGGAAACGACAGGCTTGTCAAAGAATCTGACTTCCCAAATCTCCCATATCTTCAGGCAGTCACTAAAGAAACTCTTCGACTCCACCCATCGGCACCGTTGATCATCCGGGAATGTGCCGATGACTGTAACATCAATGGCTCATTAGTGAAGGCAAAAACTCGAGTCCTAGTCAATGCATACGCCGTAATGCGGGACCCAGATTCCTGGTCGGACCCCGACAAGTTTATGCCGGAGAGGTTCCTTGAAGGCTCGACGGAGAATATCGGTGAACACCAGATGGAAATAAAAGGACAGAATTTCCGGTTTATTCCGTTTGGGAGTGGGAAGAGAGGATGTCCGGGTGCTTCACTCGCCATGTTGGTGTTGCCTTGTGCAGTTGCAGCCTTGGTGCAACGGTTTGATTGGAAAGTGAAAGATGGAAATGATGGTGTCGATTTGAGTCCTGGAACCGGGTTTGTCCCTGAAATGGCGACGCCGATTGTTCGTTACGCAGACGCCATCAGTACTTGA 1545 46.67 MANIFAKDAPFYQFFFFWFITALLVHLLVKKYILKQKSSSSKGPLSPPGLPLIGHLHLISPVLFTSLQSLSRLYGPLIQLRLGASTCVLASNAVVAKEIFKTNEQNFLSRPEFGSSEFFIYRGSRFILAKYGAYWRFMKKLTMTRLLSTPQLALFSDIRHDEVAKLVDRIGMNSREGKPSDLSFESTTLNNNIICRMAFGTRCTGGADEAQEIKELVSEINRLAGRLGVGDILGPLKMFDFSGNRRKFVASLERFDQLVERIMKEHEEKAMDVDKKKDMLDILLEIYTDPAAEMKITRKDIKSFLLDIFMAGTDTTSAAVQWAMGELLNRPEAFQKLREEIITVVGNDRLVKESDFPNLPYLQAVTKETLRLHPSAPLIIRECADDCNINGSLVKAKTRVLVNAYAVMRDPDSWSDPDKFMPERFLEGSTENIGEHQMEIKGQNFRFIPFGSGKRGCPGASLAMLVLPCAVAALVQRFDWKVKDGNDGVDLSPGTGFVPEMATPIVRYADAIST 514
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 11243630 11246454 + evm.model.ptg000018l.29 HCH11g0586 554053
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0586 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 Gene3D Cytochrome P450 36 507 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 Pfam Cytochrome P450 44 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 23 504 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
HCH11g0586 514 SUPERFAMILY Cytochrome P450 40 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0586 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH11g0586 514 FunFam Cytochrome P450 family protein 35 507 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0586 HCH-Chr11:11243630 HCH4g1171 HCH-Chr4:7861537 4.30E-114 dispersed
HCH11g0586 HCH-Chr11:11243630 HCH9g1132 HCH-Chr9:14652877 1.10E-114 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0586 - - - 0.0