Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH11g0735 | ATGGCTGCCAATTTCACTTTGCTTCAACCTTCTTCATTTCTCTCAACCTCATCTTCCCTTCACCATAAATTTCCTTCTCAAAGATTAAAATGCACTTCCTCTACTTCCTCTTCCTCTTTATATCCACAATTCCATGGAGGAAGTTATGGTTTATGCATCGTTAAATGTGCTTCTTCCTCTAATGGGACGGAGCCGGATTCTTTGGATACTGGAGTTAAAAGTGTTGAGAGACTACTTGAAGAGAAACGTCGAGCTGAATTATCTGCTCGGATTGCTTCCGGTGAATTCACCGTCGAAAAACCCGGTTTTCCATCTGTAGTGAGGAATGGCTTATCAAAGTTGGGTGTTTCCAGTGAGGTTTTAGATGTGTTATTTGGTTGGCTCAATGCCCGTGAAGAATATCCCAGGGTTCCTGAAGCAAAAGGGTCAATAAGTGCAATTCGTAGTGAGGCCTTCTTTATACCTTTGTATGAGCTATACCTCACGTATGGTGGAATATTTAGATTGACTTTTGGTCCAAAGTCATTTTTGATAGTTTCTGATCCTTCCATTGCTAAACATATACTCAAGGATAACGCAAAGGCTTATTCTAAGGGTATTTTGGCTGAAATTCTGGAATTTGTCATGGGGAAGGGACTTATACCAGCGGATGGAGAAATATGGCGTGTACGAAGACGGGCTATTGTCCCATCTTTGCATATGAAGTATGTAGCGGCTATGATTAATCTCTTTGGAGAAGCTGCAGATAGGCTTTGCAAGAACCTAGATGCTGCAGCATCTGATGGAGTAGATGTGGAAATGGAGTCCCTATTCTCCCGTCTGACTTTAGATATCATTGGCAAGGCAGTTTTTAACTATGACTTTGATTCACTTACAAATGACACTGGCATAGTTGAGGCTGTTTACACTGTGCTAAGAGAAGCAGAAGATCGCAGTGTTGCACCAATTCCATTTTGGGACATTCCATTTTGGAAGGATATTTCACCACGGCAAAGAAAGGTCTCTAAAGCCCTCAAATTAATAAACGACACCCTCGATCAACTAATTGCCATATGTAAGAGGATGGTTGATGAGGAGGAGCTGCAGTTTCACGAGGAATACATGAATGAGCAAGACCCTAGCATTCTCCACTTCCTTCTGGCATCAGGAGATGATGTTTCAAGCAAGCAACTTCGCGATGACTTGATGACTATGCTTATAGCTGGGCATGAAACATCAGCTGCAGTTCTAACGTGGACCTTTTATCTCCTTTCCAAGGAGCCAAGGATCATGTCCAAGCTCCAAGCGGAGGTTGATTCGGTCCTTGGCGATCGGTTTCCAACTATTGAAGATATGAAGAACCTCAAATATGCTACGCGAGTAATAAATGAATCCTTGAGGCTTTACCCACAGCCTCCAGTTTTAATTCGAAGATCTCTCAACAATGATATGCTCGGAAAGTACCCAATAAAAAGGGGTGAGGACATATTCATTTCTGTCTGGAACTTGCATAACAGTCCAACACTCTGGGATGATGCAGATAAATTCAATCCTGAAAGATGGCCCTTAGATGGACCCAATCCAAATGAGACGAATCAAAATTTCAGATATTTGCCTTTCGGTGGTGGACCTCGAAAATGTGTAGGAGACATGTTTGCTTCGTATGAGACTGTTGTAGCACTTGCAATGCTTGTTCGGCGATTTGACTTCGAAATGGCACTTGGAGCACCTCCGGTAAAGATGACAACAGGAGCAACAATTCACACGACAGATGGATTGAAAATGTCGGTTACACGAAGAATGAAACCTCCAATCATACCGACACTAGAGATGCCTGCGGTGAGAGCTGACTCATCTGTTGGCTTCTTGAAAGATGACACACCAGTTAGTCAGGAAGGTGAAGTTTCTTCTGCTGCTCATTCCTGA | 1905 | 42.78 | MAANFTLLQPSSFLSTSSSLHHKFPSQRLKCTSSTSSSSLYPQFHGGSYGLCIVKCASSSNGTEPDSLDTGVKSVERLLEEKRRAELSARIASGEFTVEKPGFPSVVRNGLSKLGVSSEVLDVLFGWLNAREEYPRVPEAKGSISAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILKDNAKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPSLHMKYVAAMINLFGEAADRLCKNLDAAASDGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPFWDIPFWKDISPRQRKVSKALKLINDTLDQLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRIMSKLQAEVDSVLGDRFPTIEDMKNLKYATRVINESLRLYPQPPVLIRRSLNNDMLGKYPIKRGEDIFISVWNLHNSPTLWDDADKFNPERWPLDGPNPNETNQNFRYLPFGGGPRKCVGDMFASYETVVALAMLVRRFDFEMALGAPPVKMTTGATIHTTDGLKMSVTRRMKPPIIPTLEMPAVRADSSVGFLKDDTPVSQEGEVSSAAHS | 634 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 35848243 | 35855773 | + | evm.model.ptg000004l.646 | HCH11g0735 | 554202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH11g0735 | 634 | Gene3D | Cytochrome P450 | 135 | 599 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | MobiDBLite | consensus disorder prediction | 615 | 634 | - | - | |
| HCH11g0735 | 634 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 533 | 542 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH11g0735 | 634 | PRINTS | P450 superfamily signature | 453 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | P450 superfamily signature | 401 | 418 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | P450 superfamily signature | 531 | 540 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | P450 superfamily signature | 540 | 551 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | FunFam | Carotene epsilon-monooxygenase, chloroplastic | 138 | 595 | - | - | |
| HCH11g0735 | 634 | Pfam | Cytochrome P450 | 157 | 577 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | E-class P450 group I signature | 540 | 563 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | E-class P450 group I signature | 452 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | E-class P450 group I signature | 492 | 516 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | E-class P450 group I signature | 530 | 540 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | E-class P450 group I signature | 390 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | E-class P450 group I signature | 410 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | PRINTS | E-class P450 group I signature | 160 | 179 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | SUPERFAMILY | Cytochrome P450 | 149 | 593 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g0735 | 634 | CDD | CYP97 | 154 | 587 | - | - | |
| HCH11g0735 | 634 | PANTHER | CYTOCHROME P450 FAMILY 4 | 148 | 590 | IPR050196 | GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g0735 | HCH-Chr11:35848243 | HCH9g0539 | HCH-Chr9:3472918 | 2.10E-131 | dispersed | |
| HCH11g0735 | HCH-Chr11:35848243 | HCH1g0254 | HCH-Chr1:41739573 | 1.00E-32 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH11g0735 | K15747 | - | csv:101215492 | 1064.68 |