Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0735 ATGGCTGCCAATTTCACTTTGCTTCAACCTTCTTCATTTCTCTCAACCTCATCTTCCCTTCACCATAAATTTCCTTCTCAAAGATTAAAATGCACTTCCTCTACTTCCTCTTCCTCTTTATATCCACAATTCCATGGAGGAAGTTATGGTTTATGCATCGTTAAATGTGCTTCTTCCTCTAATGGGACGGAGCCGGATTCTTTGGATACTGGAGTTAAAAGTGTTGAGAGACTACTTGAAGAGAAACGTCGAGCTGAATTATCTGCTCGGATTGCTTCCGGTGAATTCACCGTCGAAAAACCCGGTTTTCCATCTGTAGTGAGGAATGGCTTATCAAAGTTGGGTGTTTCCAGTGAGGTTTTAGATGTGTTATTTGGTTGGCTCAATGCCCGTGAAGAATATCCCAGGGTTCCTGAAGCAAAAGGGTCAATAAGTGCAATTCGTAGTGAGGCCTTCTTTATACCTTTGTATGAGCTATACCTCACGTATGGTGGAATATTTAGATTGACTTTTGGTCCAAAGTCATTTTTGATAGTTTCTGATCCTTCCATTGCTAAACATATACTCAAGGATAACGCAAAGGCTTATTCTAAGGGTATTTTGGCTGAAATTCTGGAATTTGTCATGGGGAAGGGACTTATACCAGCGGATGGAGAAATATGGCGTGTACGAAGACGGGCTATTGTCCCATCTTTGCATATGAAGTATGTAGCGGCTATGATTAATCTCTTTGGAGAAGCTGCAGATAGGCTTTGCAAGAACCTAGATGCTGCAGCATCTGATGGAGTAGATGTGGAAATGGAGTCCCTATTCTCCCGTCTGACTTTAGATATCATTGGCAAGGCAGTTTTTAACTATGACTTTGATTCACTTACAAATGACACTGGCATAGTTGAGGCTGTTTACACTGTGCTAAGAGAAGCAGAAGATCGCAGTGTTGCACCAATTCCATTTTGGGACATTCCATTTTGGAAGGATATTTCACCACGGCAAAGAAAGGTCTCTAAAGCCCTCAAATTAATAAACGACACCCTCGATCAACTAATTGCCATATGTAAGAGGATGGTTGATGAGGAGGAGCTGCAGTTTCACGAGGAATACATGAATGAGCAAGACCCTAGCATTCTCCACTTCCTTCTGGCATCAGGAGATGATGTTTCAAGCAAGCAACTTCGCGATGACTTGATGACTATGCTTATAGCTGGGCATGAAACATCAGCTGCAGTTCTAACGTGGACCTTTTATCTCCTTTCCAAGGAGCCAAGGATCATGTCCAAGCTCCAAGCGGAGGTTGATTCGGTCCTTGGCGATCGGTTTCCAACTATTGAAGATATGAAGAACCTCAAATATGCTACGCGAGTAATAAATGAATCCTTGAGGCTTTACCCACAGCCTCCAGTTTTAATTCGAAGATCTCTCAACAATGATATGCTCGGAAAGTACCCAATAAAAAGGGGTGAGGACATATTCATTTCTGTCTGGAACTTGCATAACAGTCCAACACTCTGGGATGATGCAGATAAATTCAATCCTGAAAGATGGCCCTTAGATGGACCCAATCCAAATGAGACGAATCAAAATTTCAGATATTTGCCTTTCGGTGGTGGACCTCGAAAATGTGTAGGAGACATGTTTGCTTCGTATGAGACTGTTGTAGCACTTGCAATGCTTGTTCGGCGATTTGACTTCGAAATGGCACTTGGAGCACCTCCGGTAAAGATGACAACAGGAGCAACAATTCACACGACAGATGGATTGAAAATGTCGGTTACACGAAGAATGAAACCTCCAATCATACCGACACTAGAGATGCCTGCGGTGAGAGCTGACTCATCTGTTGGCTTCTTGAAAGATGACACACCAGTTAGTCAGGAAGGTGAAGTTTCTTCTGCTGCTCATTCCTGA 1905 42.78 MAANFTLLQPSSFLSTSSSLHHKFPSQRLKCTSSTSSSSLYPQFHGGSYGLCIVKCASSSNGTEPDSLDTGVKSVERLLEEKRRAELSARIASGEFTVEKPGFPSVVRNGLSKLGVSSEVLDVLFGWLNAREEYPRVPEAKGSISAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILKDNAKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPSLHMKYVAAMINLFGEAADRLCKNLDAAASDGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPFWDIPFWKDISPRQRKVSKALKLINDTLDQLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRIMSKLQAEVDSVLGDRFPTIEDMKNLKYATRVINESLRLYPQPPVLIRRSLNNDMLGKYPIKRGEDIFISVWNLHNSPTLWDDADKFNPERWPLDGPNPNETNQNFRYLPFGGGPRKCVGDMFASYETVVALAMLVRRFDFEMALGAPPVKMTTGATIHTTDGLKMSVTRRMKPPIIPTLEMPAVRADSSVGFLKDDTPVSQEGEVSSAAHS 634
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 35848243 35855773 + evm.model.ptg000004l.646 HCH11g0735 554202
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0735 634 Gene3D Cytochrome P450 135 599 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 MobiDBLite consensus disorder prediction 615 634 - -
HCH11g0735 634 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 533 542 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH11g0735 634 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS P450 superfamily signature 401 418 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS P450 superfamily signature 531 540 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS P450 superfamily signature 540 551 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 FunFam Carotene epsilon-monooxygenase, chloroplastic 138 595 - -
HCH11g0735 634 Pfam Cytochrome P450 157 577 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS E-class P450 group I signature 540 563 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS E-class P450 group I signature 452 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS E-class P450 group I signature 492 516 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS E-class P450 group I signature 530 540 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS E-class P450 group I signature 390 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS E-class P450 group I signature 410 436 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 PRINTS E-class P450 group I signature 160 179 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 SUPERFAMILY Cytochrome P450 149 593 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g0735 634 CDD CYP97 154 587 - -
HCH11g0735 634 PANTHER CYTOCHROME P450 FAMILY 4 148 590 IPR050196 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0735 HCH-Chr11:35848243 HCH9g0539 HCH-Chr9:3472918 2.10E-131 dispersed
HCH11g0735 HCH-Chr11:35848243 HCH1g0254 HCH-Chr1:41739573 1.00E-32 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0735 K15747 - csv:101215492 1064.68