Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0743 | ATGCTTGACAAAGAATTTTTCACAGAATATGGGGAAGCTACTCAATATGAAATTCAGGAGGTTATAGGAAGAGGAAGTTATGGTGTTGTTGCATCTGCTGTAGATACTCACACTGGTGAGAAAGTTGCCATCAAGAAGATAAATGATGTCTTCGAGCATGTTTCCGATGCCACGCGAATTCTGCGTGAAGTTAAGCTTCTACGCCTTCTTCATCATCCCGATATTGTCGATATAAAACATATAATGCTCCCTCCATCAAGAAGGGAGTTTAAGGATTTGTACATTGTATTTGAGTTGATGGAGTCTGATCTTCATCAAGTACTCAGGGCTAATGATGATCTTACCCCGGATCATCATCAATTCTTCTTGTATCAGCTTCTTAGAGCCTTGAAGTACATACATTCAGCACACGTGTTCCATAGAGATTTGAAGCCAAAGAATATACTTGCCAATGCTGACTGTAAATTGAAGATCTGCGACTTCGGGCTTGCTCGTGCTTCTTTTACTGATGCGCCATCAGCTATTTTCTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCCGAACTCTGTGGTTCTTTTTTCTCGAAGTATACACCAGCTATCGACATTTGGAGCATAGGATGTATATTTGCTGAAATGTTGGCTGGGAAACCCTTGTTTCCTGGGAGGAGTGTTGTCCATCAACTAGATCTAATAACTGATTTACTTGGCACTCCTACTGCTGACTCTATTGCCAAGATTCGTAATGAAAAGGCTAAAAGATATTTGAATAGCATGAGAAAAAAGCATCCAATTGCTCTCTCAAGAAAGTTCCCTAATGCAGATCCGCTAGCTCTTCGTTTACTCGAGCGTTTGCTTGCTTTTGATCCTAATGACCGACCATCCGCTGAAGATGCATTAGCTGATCCATATTTCTATGGACTTGCAAATGTGAAGAACGAACCATCCATGCAACCCATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGAAAATTGATCAAAGATGATGTCAGAGAGCTTATCTATAGAGAAATCCTAGAGTATCATCCTCAGATGCTACAAGAGTACCTTCAAGGTTCTGAGAGTCACTTCATGTATCCTAGTGGAATTGATCGATTTAAGCGACAATTTGCTAATCTCGAGGATCATTATGGTAAAGGTGAAAAAAGCAGCAAACCACTTCAAAGGAAGCATGCCTCCTTGCCTAGGGAGCGAATATGTACACCAAGAGATGTAGACGACCGTAAAAATTGTAAAACAGAAAAGCGCAATGCAGTTTCAGTTGATCGTGCAACCCTTCAGAGCCCTCCAAGATCAAAAGGGCTGGACAATCCTGCAACAACTTATTCAAAAACTGTCCAGAATGGTCCAATCAAAGCTGACTCCAGTAATTATAGCCTGTTGAAGAGTGCAAGTATAAATTGTTCAAAATGGGTGGATCTAAAAGGCAAAGATTGCACTGAAGAAAGAATACCTGAATATTGCTAG | 1494 | 40.76 | MLDKEFFTEYGEATQYEIQEVIGRGSYGVVASAVDTHTGEKVAIKKINDVFEHVSDATRILREVKLLRLLHHPDIVDIKHIMLPPSRREFKDLYIVFELMESDLHQVLRANDDLTPDHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFTDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLAGKPLFPGRSVVHQLDLITDLLGTPTADSIAKIRNEKAKRYLNSMRKKHPIALSRKFPNADPLALRLLERLLAFDPNDRPSAEDALADPYFYGLANVKNEPSMQPISKLEFEFERRKLIKDDVRELIYREILEYHPQMLQEYLQGSESHFMYPSGIDRFKRQFANLEDHYGKGEKSSKPLQRKHASLPRERICTPRDVDDRKNCKTEKRNAVSVDRATLQSPPRSKGLDNPATTYSKTVQNGPIKADSSNYSLLKSASINCSKWVDLKGKDCTEERIPEYC | 497 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 36188735 | 36191553 | + | evm.model.ptg000004l.638 | HCH11g0743 | 554210 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0743 | 497 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 46 | IPR017441 | GO:0005524(InterPro) | |
HCH11g0743 | 497 | Pfam | Protein kinase domain | 16 | 307 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH11g0743 | 497 | CDD | STKc_TDY_MAPK | 15 | 352 | - | - | |
HCH11g0743 | 497 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 13 | 348 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
HCH11g0743 | 497 | FunFam | Mitogen-activated protein kinase | 102 | 330 | - | - | |
HCH11g0743 | 497 | MobiDBLite | consensus disorder prediction | 429 | 458 | - | - | |
HCH11g0743 | 497 | Gene3D | Transferase(Phosphotransferase) domain 1 | 102 | 330 | - | - | |
HCH11g0743 | 497 | Gene3D | Phosphorylase Kinase; domain 1 | 32 | 353 | - | - | |
HCH11g0743 | 497 | MobiDBLite | consensus disorder prediction | 386 | 405 | - | - | |
HCH11g0743 | 497 | FunFam | Mitogen-activated protein kinase | 5 | 108 | - | - | |
HCH11g0743 | 497 | ProSitePatterns | MAP kinase signature. | 51 | 154 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH11g0743 | 497 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 311 | IPR011009 | - | |
HCH11g0743 | 497 | SMART | serkin_6 | 16 | 307 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH11g0743 | 497 | MobiDBLite | consensus disorder prediction | 425 | 458 | - | - | |
HCH11g0743 | 497 | ProSiteProfiles | Protein kinase domain profile. | 16 | 307 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0743 | HCH-Chr11:36188735 | HCH6g1629 | HCH-Chr6:49363903 | 6.50E-192 | dispersed | |
HCH13g0999 | HCH-Chr13:24577761 | HCH11g0743 | HCH-Chr11:36188735 | 1.00E-19 | transposed | |
HCH8g1125 | HCH-Chr8:46964354 | HCH11g0743 | HCH-Chr11:36188735 | 5.30E-207 | transposed | |
HCH11g0743 | HCH-Chr11:36188735 | HCH7g0055 | HCH-Chr7:379128 | 1.30E-187 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81063 | PF00069 | Pkinase | 6.40E-68 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0743 | - | - | - | 0.0 |