Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0745 ATGGCAACTTCTTCATCTAGCTTCTCAAAGCTGAATCATTTCCTTTTTCTTCTTTTCAATCTTCCTCTTTTTGTTAATCCAGTTTCTTTCAAAATAGATCGATTCAAGCCCAATGAAAACAATATACTTTATCAAGGAGATGCAGTTCCTGCTATTGGAACCGTTGAATTTACCAACGTTAATTACTTATACCGTGTTGGATGGGCTACCTATGCACAGGCAGTGCCTCTTTGGGATTCTAAAACAGGAAAAGTCACTGATTTCAAAACCCACTTCTCTTTCTCAATTGATACTCGAGGAAAGCCAAGCTTAAACTATGGCCATGGCTTTGCTTTCTTTTTAGCTCCATCTGGATTTCAAATCCCTCCAAACTCAGCTTCTGGATTTCTTGGCTTATTCAACACGTCAACCACTGATTCATCTAGAAACCAAATTGTTCATGTTGAGTTTGATTCTTACCCTAACACAGTTGATGGATGGGATCCTGGTTATGAACATGTGGGAATAAATAATAATTCGATTTCATCTTCGGTTTTTACTCGTTGGAATGCTAGTTTACACAGTGGGGATGTTGCTGATGTGTGGATTTCCTATGATTCAAACACTAAAAATTTAAGTGTCTCATGGAAATACCCAAACATGTCGAAGTCGTCGTTCGAAAACACAAGTCTTGATTTCGAGATTGATTTGATGAAGGTTCTTCCGCAATGGGTGACGGTGGGATTTTCTGCTGCAACTGGATCAGTTGTCGAGAGACATACTTTGCTTTCTTGGGAATTCGATTCGAGTTTGGATATAAAGCAATCAAGTGAAAATAAGGGGAAAAGGATTGATATAATTGTGGGTGTAACAGTTTCTGTTGGAGTGCTGCTTGCTATGACAATAATAGTACTTTGGAGATGGAAACAAAAGAAGAACAATGAAATTCCTGAAGAAGGAAACTTGACTTCCATTAATGATGATTTGGAAAGAGAAGCGGGACCAAGAAGGTTTTCTTATGAACTTCTTGCCATGGCAACAAACAACTTCTCAACTGAAAGGAAGTTAGGTGAAGGAGGATTTGGTGCAGTTTACAGAGGGCAGATAGCAAATATAAATTTGACAGTAGCTGTGAAGAAGATCTCAAGGGGTTCAAAACAAGGAAGAAAAGAGTATATAACTGAGGTGAAGGTCATTAGTCGGCTTCGGCACCGGAATCTAGTGCAGCTCATCGGTTGGTGCCATGACAAGGGTGAGTTCTTGCTTGTTTACGAGTTTATGCCCAACGGAAGCCTCGATTCGCATCTCTTTCCTAGGAGAAATCTTCTTCCATGGGAGGTACGATACAAGATTGCTTTAGGTTTAGCTTCTGCATTGTTATATCTTCACGAAGAATGGGAACAATGTGTGATTCACAGAGATATTAAATCAAGCAATGTAATGTTAGATTCAAATTTCAATGTCAAGCTTGGCGATTTCGGTCTCGCTCGGCTGATGGACCATGAGATAGGAGCTCAGACAACTGGGTTGGTAGGAACTTTGGGGTACATGGCTCCAGAATACATAAGTACAGGCAGAGCTAGTAAGGAATCTGATGTTTATAGTTTTGGAGTGGTTGCTTTGGAAATTGCAACAGGAAGAATGTCAAGAGGTACCATTGAAAAGGAATCTCATAAGGGTTTGGTGGAGTTTGTATGGGATCTCTATGGAAGTGGACAATTACTCGAGGGGATAGATGAGAAATTGCTCAAGTCTGATTATAACAAAAAACAAGTGGAGTGTTTGATGATTGTTGGGCTGTGGAGTGCTTATCCTGACCCTAATCTCAGACCTTCAATAAGACAAGCAATTCAAGTTCTTAATTTTGAGACAACAATGCCAAATCTTCCAACTAAAATGCCTGTACCTGTATATCATGCTCCAAGCACATCACTTAGCTCCAATGAACCCTCTGTTACTGACAAAGTGAGAAGGACCGAGATCGAATGGATGAGCAGGACCAGTAGCCAGCGACCTTGCTCTGTTTTTTTGCTTTGGGTGAGCATGACCAGTGAGCAACCATGGAAAGCTTCTCCTTCTATGAATTTTGTTTATAGCCAATCAGGAAAATGCTCATTGCCAGTGAACCTTCTTGATGCTATTTTAACAATTGCTTGCATCTTGGAGAACCAGGGATCAAGGTCGGAGATATGGGTGTTGAGCAAGCAGAACCACGATTAG 2199 40.47 MATSSSSFSKLNHFLFLLFNLPLFVNPVSFKIDRFKPNENNILYQGDAVPAIGTVEFTNVNYLYRVGWATYAQAVPLWDSKTGKVTDFKTHFSFSIDTRGKPSLNYGHGFAFFLAPSGFQIPPNSASGFLGLFNTSTTDSSRNQIVHVEFDSYPNTVDGWDPGYEHVGINNNSISSSVFTRWNASLHSGDVADVWISYDSNTKNLSVSWKYPNMSKSSFENTSLDFEIDLMKVLPQWVTVGFSAATGSVVERHTLLSWEFDSSLDIKQSSENKGKRIDIIVGVTVSVGVLLAMTIIVLWRWKQKKNNEIPEEGNLTSINDDLEREAGPRRFSYELLAMATNNFSTERKLGEGGFGAVYRGQIANINLTVAVKKISRGSKQGRKEYITEVKVISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFPRRNLLPWEVRYKIALGLASALLYLHEEWEQCVIHRDIKSSNVMLDSNFNVKLGDFGLARLMDHEIGAQTTGLVGTLGYMAPEYISTGRASKESDVYSFGVVALEIATGRMSRGTIEKESHKGLVEFVWDLYGSGQLLEGIDEKLLKSDYNKKQVECLMIVGLWSAYPDPNLRPSIRQAIQVLNFETTMPNLPTKMPVPVYHAPSTSLSSNEPSVTDKVRRTEIEWMSRTSSQRPCSVFLLWVSMTSEQPWKASPSMNFVYSQSGKCSLPVNLLDAILTIACILENQGSRSEIWVLSKQNHD 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 36248988 36252987 + evm.model.ptg000004l.636 HCH11g0745 554212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0745 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH11g0745 732 Gene3D Transferase(Phosphotransferase) domain 1 420 635 - -
HCH11g0745 732 SMART serkin_6 343 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH11g0745 732 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 264 IPR013320 -
HCH11g0745 732 ProSitePatterns Protein kinases ATP-binding region signature. 349 373 IPR017441 GO:0005524(InterPro)
HCH11g0745 732 Gene3D - 26 279 - -
HCH11g0745 732 ProSiteProfiles Protein kinase domain profile. 343 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH11g0745 732 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
HCH11g0745 732 CDD lectin_legume_LecRK_Arcelin_ConA 28 264 IPR001220 GO:0030246(InterPro)
HCH11g0745 732 Pfam Legume lectin domain 28 273 IPR001220 GO:0030246(InterPro)
HCH11g0745 732 CDD STKc_IRAK 349 614 - -
HCH11g0745 732 FunFam Lectin-domain containing receptor kinase A4.3 420 633 - -
HCH11g0745 732 Pfam Protein kinase domain 344 550 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH11g0745 732 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
HCH11g0745 732 SUPERFAMILY Protein kinase-like (PK-like) 328 643 IPR011009 -
HCH11g0745 732 PANTHER - 53 639 IPR050528 GO:0005886(PANTHER)
HCH11g0745 732 FunFam L-type lectin-domain containing receptor kinase IX.1 328 419 - -
HCH11g0745 732 FunFam L-type lectin-domain containing receptor kinase IX.1 26 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0745 HCH-Chr11:36248988 HCH11g0748 HCH-Chr11:36519623 1.90E-176 dispersed
HCH11g0745 HCH-Chr11:36248988 HCH11g0746 HCH-Chr11:36420514 2.20E-180 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81064 PF00069 Pkinase 4.90E-50 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0745 - - - 0.0