Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0746 ATGGCCATCTTCTGCTCAATCTCTTACCATCCCGGAATTCAAATTTCAATCATCTTCTTATTCTCTTTGTATCTCTCCACTGCTCACTCACTTTCCTTCAACTTCTCAACTTTCAAAAACAACATGCTGGACTTACTTCTGGAAAACAATAGCTTCATCAACAATGATGTTATAGAACTCACAAGGAACCAAATCGATGGCCCGCTTACTAGCAGCGTCGGCCGTGCATCGTATGCTCATCCAATACCCCTATGGGATGCTTCCACAGGAAAGGTTACAGATTTCAACACTGAATTCTCTTTCAATATCACTTCTTTTAACAATCAAACTTATGGCGATGGCATCGCCTTCTTCATCGTTCCTTACGACTCGAGGACCCCCAAGAGCTCGGCCGGAGGGTATCTTGGACTATTTAGCAACGAATCTGCTTTAAATAATGACACCAAAAACCAAGTAGTTGCAGTTGAGTTTGACAGTTTTAAGAATGTCTGGGATCCGAGTAATGATCACTTAGGAATTAATGTCAATTCTATTCAGTCTGCAGCTAATGTCATATGGAACAGTAGCATGAGAAATGGAAGAATAGGAAGGGCATGGGTAAGGTATAATTCCACCACTCAAAACTTGTCTGTTTTTTTAACTTATGATCGAAATGCTGTTTTTACTGGGAATTTTAGCCTTTCTCTTAATGTTGATCTGAGAAAAATACTGCCAGAATGGGTCAGGGTTGGTTTCTCTGCTGCCACAGGGGATTTAGTTCAGATACATAAAATCATTTCTTGGTCGTTCACTTCAAGCTTGGAAACTAATAAAGGAAAAGGAAAACGAAATACAACTGGTTTAGCAATCGGCTTAGGTGTTGGATTGAGTTTTTTGATTTGTGGGTTTGGTTTGGTTGGGTATATTTATTGGAGGAAGAGTGTTGGCGGGAGAATGGAAGATGTGGATTTTTCAATGGATGATGAATTTGAAAGAGGAACTGGGCCAAAAAGGTTCACTTACCGAGAATTAACTCGAGCAACGAAGAATTTCGATGAGGCGGGAAAGCTTGGAGAAGGAGGGTTTGGAGGTGTTTATAAGGGTTTGTTAACAGAATCCAATACAGAAATAGCTGTGAAAAGAGTCTCAAGAGGATCAAGACAAGGTAAAAAAGAGTATATATCTGAAGTGAAGATTATTAGTCGATTGAGGCATAGAAATTTGGTTCAACTCTTTGGTTGGTGTCATGAACGAGGTGAGTTCCTTCTGGTCTATGAGTTTATGCCCAATGGAAGTCTTGATTCCCATCTCTTTGGAAGAAAAATGATACTAACTTGGACAGTAAGATACAAAATAGCACTTGGTTTGGCCTCTGCCTTATTGTATCTACATGAAGAATGGGAACAATGTGTTGTGCATAGAGATATCAAGTCAAGCAATGTAATGTTGGACTCAAATTTCAATGCCAAGCTCGGCGATTTCGGTCTCGCGAGGTTTGTTGACCACGAATTAGGCTCACAAACAACAGTCTTGGCAGGCACCATGGGCTATCTAGCTCCAGAGTGTGTCACAGATGGCAAGGCTAGCAAAGAGTCTGATGTGTATAGTTTCGGAGTTGTTGCTCTTGAAATTGCGTGTGGAAGGAGGCCAGTTGAATCGAGAGCAGAACCGAATCAAGTGAGGCTTGTAGAATGGGTTTGGGAGCTTTATGGAAGAGGCGAAATCCTAGAAGCTGTGGATAAGAGACTAGAAATGGATTTTGATGAACAACAAATGGAGTATTTGATGGTTGTGGGATTGTGGTGTTGCCACCCTGACTATAAAATGAGACCTTCCATAAGACAAGTGATTAATATCTTAAATTCTGAAGCTCCATTGCCTGCATTGCCATCAAAATTACCGGTGCCTATGTATTTTGCCCCATCGTTGAATTTGTGCAAGTTCTCTTACACATCGTCTGGCACGGCAGACACGTCGAGAGATCGAAGCCAGTGCTCATGTAGTAGCTGCTCAACTGACACTAAGCAGCCTTCCGGATCAAGTATACCTCTTTTGAAATCGTAA 2043 41.31 MAIFCSISYHPGIQISIIFLFSLYLSTAHSLSFNFSTFKNNMLDLLLENNSFINNDVIELTRNQIDGPLTSSVGRASYAHPIPLWDASTGKVTDFNTEFSFNITSFNNQTYGDGIAFFIVPYDSRTPKSSAGGYLGLFSNESALNNDTKNQVVAVEFDSFKNVWDPSNDHLGINVNSIQSAANVIWNSSMRNGRIGRAWVRYNSTTQNLSVFLTYDRNAVFTGNFSLSLNVDLRKILPEWVRVGFSAATGDLVQIHKIISWSFTSSLETNKGKGKRNTTGLAIGLGVGLSFLICGFGLVGYIYWRKSVGGRMEDVDFSMDDEFERGTGPKRFTYRELTRATKNFDEAGKLGEGGFGGVYKGLLTESNTEIAVKRVSRGSRQGKKEYISEVKIISRLRHRNLVQLFGWCHERGEFLLVYEFMPNGSLDSHLFGRKMILTWTVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNAKLGDFGLARFVDHELGSQTTVLAGTMGYLAPECVTDGKASKESDVYSFGVVALEIACGRRPVESRAEPNQVRLVEWVWELYGRGEILEAVDKRLEMDFDEQQMEYLMVVGLWCCHPDYKMRPSIRQVINILNSEAPLPALPSKLPVPMYFAPSLNLCKFSYTSSGTADTSRDRSQCSCSSCSTDTKQPSGSSIPLLKS 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 36420514 36422556 - evm.model.ptg000004l.635 HCH11g0746 554213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0746 680 Gene3D Transferase(Phosphotransferase) domain 1 421 634 - -
HCH11g0746 680 Pfam Protein kinase domain 346 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH11g0746 680 SUPERFAMILY Protein kinase-like (PK-like) 328 637 IPR011009 -
HCH11g0746 680 FunFam L-type lectin-domain containing receptor kinase IX.1 29 276 - -
HCH11g0746 680 Pfam Legume lectin domain 30 274 IPR001220 GO:0030246(InterPro)
HCH11g0746 680 CDD lectin_legume_LecRK_Arcelin_ConA 31 267 IPR001220 GO:0030246(InterPro)
HCH11g0746 680 PANTHER - 37 638 IPR050528 GO:0005886(PANTHER)
HCH11g0746 680 SMART serkin_6 344 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH11g0746 680 MobiDBLite consensus disorder prediction 646 680 - -
HCH11g0746 680 CDD STKc_IRAK 358 614 - -
HCH11g0746 680 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
HCH11g0746 680 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
HCH11g0746 680 FunFam L-type lectin-domain containing receptor kinase IX.1 329 420 - -
HCH11g0746 680 FunFam Lectin-domain containing receptor kinase A4.3 421 633 - -
HCH11g0746 680 ProSiteProfiles Protein kinase domain profile. 344 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH11g0746 680 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524(InterPro)
HCH11g0746 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 269 IPR013320 -
HCH11g0746 680 Gene3D - 28 281 - -
HCH11g0746 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH11g0746 680 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0746 HCH-Chr11:36420514 HCH7g0800 HCH-Chr7:14169410 1.10E-186 dispersed
HCH11g0746 HCH-Chr11:36420514 HCH11g0748 HCH-Chr11:36519623 2.00E-305 proximal
HCH11g0745 HCH-Chr11:36248988 HCH11g0746 HCH-Chr11:36420514 2.20E-180 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81065 PF00069 Pkinase 3.10E-51 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0746 - - - 0.0