Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0755 ATGGCTGGGGGAGGAATGATCCGGCAGATGCTGAGGAAATTTCCGTCTCAATCTTCAGCCCCTTCTTTAACCTCATCCCTTACTTCAAAGAAAGAGGATGTTGCTTCTGCGGGAATGAACTCCTTTAGAAGACTTGCCCTACTTGGAGCAGGCATTACTGGGTTTTTTAGTTTTTCAACTTTGGCATCAGCTGATGAGGCAGAGCATGGGTTGGAGAGCCCGAGCTATCCCTGGCCTCATGAGGGCATTTTAAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAGGTTTACCAACAAGTATGTGCATCTTGTCATTCCATGTCTTTAATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAAACAAAAGCAATGGCTGCTGAAATTGAGGTGGTTGATGGACCGAATGATGAGGGTGAAATGTTTTCTCGCCCTGGTAAACTCAGTGACCGGTTTCCTCAACCGTATTCAAATGAACAAGCGGCTCGGTTTGCTAACGGTGGAGCATACCCTCCGGATCTTAGTCTTGTCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTGCCCTTTTAACTGGTTACCGTGATCCTCCTGCTGGTGTTTCGATCCGAGAAGGCTTGCACTACAACCCTTATTTTCCTGGGGGAGCAATTGCCATGCCCAAGATGCTTAATGATGGAGCTGTTGAATACGAAGATGGTACCCCTGCAACAGAAGCACAGATGGGGAAAGATGTTGTAACCTTTTTGTCATGGGCCGCTGAACCAGAAATGGAAGAAAGAAAACTGATGGGTTTCAAATGGATCTTTGTGCTATCTCTGGCTCTACTTCAGGCTGCTTATTACCGACGATTGAAGTGGTCAGTTTTGAAATCTCGCAAGCTGGTTCTTGATGTAATCAATTAG 924 45.24 MAGGGMIRQMLRKFPSQSSAPSLTSSLTSKKEDVASAGMNSFRRLALLGAGITGFFSFSTLASADEAEHGLESPSYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFSRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLVTKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVIN 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 36747844 36750926 - evm.model.ptg000004l.626 HCH11g0755 554222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0755 307 FunFam Cytochrome c1, heme protein, mitochondrial 263 307 - -
HCH11g0755 307 FunFam Cytochrome c1, heme protein 67 262 - -
HCH11g0755 307 ProSiteProfiles Cytochrome c family profile. 90 197 IPR009056 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 Gene3D - 67 262 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 262 305 IPR021157 -
HCH11g0755 307 PRINTS Cytochrome C1 signature 212 223 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 PRINTS Cytochrome C1 signature 243 262 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 PRINTS Cytochrome C1 signature 141 161 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 PRINTS Cytochrome C1 signature 262 277 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 PRINTS Cytochrome C1 signature 174 198 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 PRINTS Cytochrome C1 signature 223 242 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 PRINTS Cytochrome C1 signature 96 115 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 PRINTS Cytochrome C1 signature 76 95 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 Pfam Cytochrome C1 family 78 294 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 Gene3D - 263 305 - -
HCH11g0755 307 SUPERFAMILY Cytochrome c 72 261 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
HCH11g0755 307 PANTHER CYTOCHROME C1 17 305 IPR002326 GO:0005750(PANTHER)|GO:0006122(PANTHER)|GO:0009055(InterPro)|GO:0020037(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0755 K00413 - csv:101215010 571.237