Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0756 ATGGCTTTGGTTCAGATTCAGGAAACTCCCAAGTGGAAGAAGCTCTTGTGTTACGTTGGACCTGGCTTCCTTGTCTCTGTTGCTTATCTTGATCCTGGAAACTTGCAAACAGATCTACAAGGTGGTGCTAATCACAAGTTTGAGTTGCTGTGGATTGTGCTTGTGGGGCTGATCTTTGCTTTCATAATTCAGTCTCGTTCAGCAAATCTAGGCGTTGCAACAGGGAAGCATCTTGCCGAACACTGCAAATTGGAATACCCAAAGCCTGCACGCTACTGCTTGTGGTTTCTTGCTGAGATTTCTGTTATAGCAGCTGACATCCCAGAAGTGATAGGAACGGCATTTGCTCTAAATATTCTGTTGGAAATACCCATATGGGGTGGGGTTTTACTAGCTGGATTAAACACTCTCCTCCTACTTGGACTTCAACGATATGGAATAAGGAAGTTGGAGATTTTAATAGCAGTAATGGTGATGGTAGTGGGATGCTGTTTCTTCAGTGTGATGGTAGGGGCCAAACCCAGCACCAAAGAGATAGTGAGTGGAGTTTTTGTTCCCAAGTTGAGAGGAAAAGAGGCTGTCAGAGATGCCATTGCTCTTTTAGGAGCTCTTATTATGCCGCACAACTTTTTTCTTCATTCAGCATTAGTTATCTCAAGGAAATTCCCCCACTCTGCTGAAGGCATTAAGAGTGCATGTAAATACTTCTTGATTGAAAGTGGGATAGCTCTCTTTATAGCATTTGCTATAAATGTGGCAGTCATATCAGTCACTGGTAGTGTTTGCTCCAATCAAACCTTACCTCCATCGATCCAACCACACTGCAAGAATATTACTCTTGATTCTGCTTCTATTTTGCTCAAGAATGCACTAGGCAATTGGAGTTCAAAAGTGTTTGCCATATCTTTGCTTGCCTCTGGTCAGAGTTCAACTGTTACAGGTACCTATGCAGGCCAATATATTATGCAGGGTTTTCTGGACCTGAAAATGAAACTTTGGGTGAGAAATTTGGTGACAAGATTCATCTCCATAGCTCCAAGTCTTATAGCTTGCTTAATAGGCGGATCTTCTGGTGCTGCAATGCTTATTATTATATCTTCTATGGTTTTGTCCTTTCAATTGCCATTTGCACTCATTCCTCTCCTCAAGTTTACAAGCAGTGAAGCAACGATGGGGCAGCATAAAAGCCCCCTATTGGTAACTCTAGCCTCATGGCTCTTGGGTTTTGGCTCCATTGCAATCAACTTGTATTTCTTGATCACGGTTATAAGGGAGAAAATGGACAATAATGAGTTGCCCAAGGCTGTGTCAATCCTAGTACCAGTGATTGTTTTTCCTCTAATGATGCTTTACACTGCACTCCTACTATATTTAACTTGCAAGAAAGTAGCATCATCTTCTATACCCTCCCCAGAACTGGATATTAGTTCTACTGGCTCAGGTGAAAGAGGACCCGGTTCGTTTACTGGCAACGGCAACCTAATCGAGCTCGAGGCTGATGAGATTGTTTGTGCATAA 1518 42.62 MALVQIQETPKWKKLLCYVGPGFLVSVAYLDPGNLQTDLQGGANHKFELLWIVLVGLIFAFIIQSRSANLGVATGKHLAEHCKLEYPKPARYCLWFLAEISVIAADIPEVIGTAFALNILLEIPIWGGVLLAGLNTLLLLGLQRYGIRKLEILIAVMVMVVGCCFFSVMVGAKPSTKEIVSGVFVPKLRGKEAVRDAIALLGALIMPHNFFLHSALVISRKFPHSAEGIKSACKYFLIESGIALFIAFAINVAVISVTGSVCSNQTLPPSIQPHCKNITLDSASILLKNALGNWSSKVFAISLLASGQSSTVTGTYAGQYIMQGFLDLKMKLWVRNLVTRFISIAPSLIACLIGGSSGAAMLIIISSMVLSFQLPFALIPLLKFTSSEATMGQHKSPLLVTLASWLLGFGSIAINLYFLITVIREKMDNNELPKAVSILVPVIVFPLMMLYTALLLYLTCKKVASSSIPSPELDISSTGSGERGPGSFTGNGNLIELEADEIVCA 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 36773082 36784014 - evm.model.ptg000004l.625 HCH11g0756 554223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0756 505 MobiDBLite consensus disorder prediction 467 489 - -
HCH11g0756 505 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 6 467 IPR001046 GO:0005384(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 MobiDBLite consensus disorder prediction 467 487 - -
HCH11g0756 505 Pfam Natural resistance-associated macrophage protein-like 36 395 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 13 391 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 Hamap Divalent metal cation transporter MntH [mntH]. 1 423 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 PRINTS Natural resistance-associated macrophage protein signature 94 120 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 PRINTS Natural resistance-associated macrophage protein signature 122 141 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 PRINTS Natural resistance-associated macrophage protein signature 147 168 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 PRINTS Natural resistance-associated macrophage protein signature 335 352 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 PRINTS Natural resistance-associated macrophage protein signature 197 220 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)
HCH11g0756 505 NCBIfam Nramp family divalent metal transporter 20 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0756 HCH-Chr11:36773082 HCH13g0148 HCH-Chr13:941611 4.80E-166 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0756 K21398 - vvi:100262929 688.723