Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0756 | ATGGCTTTGGTTCAGATTCAGGAAACTCCCAAGTGGAAGAAGCTCTTGTGTTACGTTGGACCTGGCTTCCTTGTCTCTGTTGCTTATCTTGATCCTGGAAACTTGCAAACAGATCTACAAGGTGGTGCTAATCACAAGTTTGAGTTGCTGTGGATTGTGCTTGTGGGGCTGATCTTTGCTTTCATAATTCAGTCTCGTTCAGCAAATCTAGGCGTTGCAACAGGGAAGCATCTTGCCGAACACTGCAAATTGGAATACCCAAAGCCTGCACGCTACTGCTTGTGGTTTCTTGCTGAGATTTCTGTTATAGCAGCTGACATCCCAGAAGTGATAGGAACGGCATTTGCTCTAAATATTCTGTTGGAAATACCCATATGGGGTGGGGTTTTACTAGCTGGATTAAACACTCTCCTCCTACTTGGACTTCAACGATATGGAATAAGGAAGTTGGAGATTTTAATAGCAGTAATGGTGATGGTAGTGGGATGCTGTTTCTTCAGTGTGATGGTAGGGGCCAAACCCAGCACCAAAGAGATAGTGAGTGGAGTTTTTGTTCCCAAGTTGAGAGGAAAAGAGGCTGTCAGAGATGCCATTGCTCTTTTAGGAGCTCTTATTATGCCGCACAACTTTTTTCTTCATTCAGCATTAGTTATCTCAAGGAAATTCCCCCACTCTGCTGAAGGCATTAAGAGTGCATGTAAATACTTCTTGATTGAAAGTGGGATAGCTCTCTTTATAGCATTTGCTATAAATGTGGCAGTCATATCAGTCACTGGTAGTGTTTGCTCCAATCAAACCTTACCTCCATCGATCCAACCACACTGCAAGAATATTACTCTTGATTCTGCTTCTATTTTGCTCAAGAATGCACTAGGCAATTGGAGTTCAAAAGTGTTTGCCATATCTTTGCTTGCCTCTGGTCAGAGTTCAACTGTTACAGGTACCTATGCAGGCCAATATATTATGCAGGGTTTTCTGGACCTGAAAATGAAACTTTGGGTGAGAAATTTGGTGACAAGATTCATCTCCATAGCTCCAAGTCTTATAGCTTGCTTAATAGGCGGATCTTCTGGTGCTGCAATGCTTATTATTATATCTTCTATGGTTTTGTCCTTTCAATTGCCATTTGCACTCATTCCTCTCCTCAAGTTTACAAGCAGTGAAGCAACGATGGGGCAGCATAAAAGCCCCCTATTGGTAACTCTAGCCTCATGGCTCTTGGGTTTTGGCTCCATTGCAATCAACTTGTATTTCTTGATCACGGTTATAAGGGAGAAAATGGACAATAATGAGTTGCCCAAGGCTGTGTCAATCCTAGTACCAGTGATTGTTTTTCCTCTAATGATGCTTTACACTGCACTCCTACTATATTTAACTTGCAAGAAAGTAGCATCATCTTCTATACCCTCCCCAGAACTGGATATTAGTTCTACTGGCTCAGGTGAAAGAGGACCCGGTTCGTTTACTGGCAACGGCAACCTAATCGAGCTCGAGGCTGATGAGATTGTTTGTGCATAA | 1518 | 42.62 | MALVQIQETPKWKKLLCYVGPGFLVSVAYLDPGNLQTDLQGGANHKFELLWIVLVGLIFAFIIQSRSANLGVATGKHLAEHCKLEYPKPARYCLWFLAEISVIAADIPEVIGTAFALNILLEIPIWGGVLLAGLNTLLLLGLQRYGIRKLEILIAVMVMVVGCCFFSVMVGAKPSTKEIVSGVFVPKLRGKEAVRDAIALLGALIMPHNFFLHSALVISRKFPHSAEGIKSACKYFLIESGIALFIAFAINVAVISVTGSVCSNQTLPPSIQPHCKNITLDSASILLKNALGNWSSKVFAISLLASGQSSTVTGTYAGQYIMQGFLDLKMKLWVRNLVTRFISIAPSLIACLIGGSSGAAMLIIISSMVLSFQLPFALIPLLKFTSSEATMGQHKSPLLVTLASWLLGFGSIAINLYFLITVIREKMDNNELPKAVSILVPVIVFPLMMLYTALLLYLTCKKVASSSIPSPELDISSTGSGERGPGSFTGNGNLIELEADEIVCA | 505 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 36773082 | 36784014 | - | evm.model.ptg000004l.625 | HCH11g0756 | 554223 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0756 | 505 | MobiDBLite | consensus disorder prediction | 467 | 489 | - | - | |
HCH11g0756 | 505 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 6 | 467 | IPR001046 | GO:0005384(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | MobiDBLite | consensus disorder prediction | 467 | 487 | - | - | |
HCH11g0756 | 505 | Pfam | Natural resistance-associated macrophage protein-like | 36 | 395 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | NCBIfam | metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 13 | 391 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | Hamap | Divalent metal cation transporter MntH [mntH]. | 1 | 423 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | PRINTS | Natural resistance-associated macrophage protein signature | 94 | 120 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | PRINTS | Natural resistance-associated macrophage protein signature | 122 | 141 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | PRINTS | Natural resistance-associated macrophage protein signature | 147 | 168 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | PRINTS | Natural resistance-associated macrophage protein signature | 335 | 352 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | PRINTS | Natural resistance-associated macrophage protein signature | 197 | 220 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | PRINTS | Natural resistance-associated macrophage protein signature | 307 | 326 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | PRINTS | Natural resistance-associated macrophage protein signature | 367 | 386 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
HCH11g0756 | 505 | NCBIfam | Nramp family divalent metal transporter | 20 | 389 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0756 | HCH-Chr11:36773082 | HCH13g0148 | HCH-Chr13:941611 | 4.80E-166 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0756 | K21398 | - | vvi:100262929 | 688.723 |