Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0771 | ATGGTTCTGGCTGGTTCTTTGCAACTGTCACATCATCCGGGACCCTGCAGGAACCATTTGCATGAAAAAAATGCTAAGTTTGCCACTGAGAGAAATAGCTTACGGTTTTGGAGTGCAGCCAGTCCATCACCTCTTTTATTTCAACGGAAGAATGTCTGGACCACTCACTTTTTCAGTATGAAAAACTTGCCTAATTACACTGTACCTTTAAGATACCATGTATTTAGGTGCCATTCATCATTGATGCCAGACCCACCATTGGATCCACTTGGGATGAAGGCAGCTTTGGTGACATTGAGAAGGTCTTATGATATATTATGTGGCAGTCCTCCTTTGGTTAACATGGTTCCTGCAATTTGTATTATTATGTTTGCTGTATGGGGTCTTGGACCATTTTTGCGTCATAGTAGAAGCCTACTTTATAGGAGTGATAATAACTGGAAAAGAAGTCGCACATATAAACTTATGACCTCGTATCTTCAACCATTATTGCTATGGACTGGAGCAACACTCATTTGCAGAGCTTTGGATCCAGTTGTTTTACCTACCGAGTCTAGCCAGGTTGTGAAGCAACGAGTATTGAATTTTTTTAGGTCGTTGTCCACTGTGCTGGCCTTTGCCTATTGCTCATCAAGCTTGATCCAACAAGCACAGAAGTTCTTCTCAGAGACTAGTGAATCCAGTGACGCAAGAAATATGGGCTTTCAATTTGCTTGGAAGGCTGTATATTCTGCAGTATGGGTTGCTGCTATCTCGTTGTTCATGGAGTTGCTGGGCTTTTCTACCCAAAAATGGCTTACAGCTGGAGGTCTTGGTACCGTGTTGCTGACACTTGCTGGCCGTGAGATATTCACAAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGTCCTTTTGTTGTTAACGAATGGATCCAGACGAGGATTGAGGGCTACGACGTTTCTGGCTCTGTTGAGCATGTAGGATGGTGGTCGCCAACAATAGTAAGAGGTGAAGATCGTGAAGCGGTTCATATACCAAACCATAAGTTTACCATGAACGTTGTTAGGAATCTCAGTCAAAAAACTCATTGGCGGATTAAAACCCACCTAGCCATTAGTCATTTGGATGTCAATAAAATTAATAATATTGTTGCTGACATGCGTAAGGTCTTGGCGAAGAACCCTCAAGTTGAACAACAAAAATTGCATAGAAGAGTATTTTTGGACAATGTTGATCATCAAAATCAGGCACTTTTGATTTTAATATCTTGTTTTGTCAAGACTTCACATTTTGAAGAATATCTCTGCGTGAAGGAAGCTATAATATTAGATCTTCTTAGAGTCATTAGTCATCACCGGGCACGACTTGCTACACCAATCCGCACAATGCAGAAGATGTATACTGATTCTGACTTGGACAACGTCCCATTTTCTGATTCAATATTTAGCCGTGGTGGTGTTACTCTAAATCGCCGCTTGCTAATGATTGAACCCCCTTACAAAGTATACGGAGAAGATAAAAAACGAAGCCAGAGTAAGTCATCACGAACCACTGGAGAACAAAACAGTAATCTCACTGCACGATCATCAGGTGACAGCAAGGCAGCCAAAGAGTCACCACCATCTGACAGAAAGACAGAAGTCAGGTCTGGAGAAGGAAGTGATTCTGCTGATACCATAAAGCATCCCAAAGTTGCAACAATGTCTACATCTAATGATAAATTGATTGATGATTTGAAACTTAAATCATCATCAAGACCTGCGTCCAACGCCAATGGCCTCTCTGATACGCCTAGTTCTGATGCCAAAGCAACCAAATCAGAGTCTGATAATTCATTTGATAATCCTGATGCCAAGCAATCCAAGAATAGCTCTGGAAGTAATAAGCAGAACGACAATTCTACGTATCCTGCTGTTTCCTTGCATGAAGACGTTAAGAAATCAAGTGGAAGTTCAGCTGCTTCACAGCCAAAGTCAGAAGGTGAAAAGACACCAGTTATAAAGCCATCAATACCGAAATCTAGTGTTGAAGAGAATATAATTCTTGGTGTTGCTTTGGATGGCTCCAAGAGAACGCTTCCTATTGAGGATGACATGGCTTCATCCCCTCAAACTACGTCAGGGACGAAGGATTTGGCTCCGGCATGCTGGAATGGAAATGGGCCAACCACTCCTAATAAGGATAAGAAACGTCAGACTCCATCTTCTCCTACCACATCTTCTGGTCAATAG | 2214 | 41.92 | MVLAGSLQLSHHPGPCRNHLHEKNAKFATERNSLRFWSAASPSPLLFQRKNVWTTHFFSMKNLPNYTVPLRYHVFRCHSSLMPDPPLDPLGMKAALVTLRRSYDILCGSPPLVNMVPAICIIMFAVWGLGPFLRHSRSLLYRSDNNWKRSRTYKLMTSYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFFRSLSTVLAFAYCSSSLIQQAQKFFSETSESSDARNMGFQFAWKAVYSAVWVAAISLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTRIEGYDVSGSVEHVGWWSPTIVRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNVDHQNQALLILISCFVKTSHFEEYLCVKEAIILDLLRVISHHRARLATPIRTMQKMYTDSDLDNVPFSDSIFSRGGVTLNRRLLMIEPPYKVYGEDKKRSQSKSSRTTGEQNSNLTARSSGDSKAAKESPPSDRKTEVRSGEGSDSADTIKHPKVATMSTSNDKLIDDLKLKSSSRPASNANGLSDTPSSDAKATKSESDNSFDNPDAKQSKNSSGSNKQNDNSTYPAVSLHEDVKKSSGSSAASQPKSEGEKTPVIKPSIPKSSVEENIILGVALDGSKRTLPIEDDMASSPQTTSGTKDLAPACWNGNGPTTPNKDKKRQTPSSPTTSSGQ | 737 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 37272987 | 37288598 | + | evm.model.ptg000004l.610 | HCH11g0771 | 554238 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0771 | 737 | MobiDBLite | consensus disorder prediction | 577 | 600 | - | - | |
HCH11g0771 | 737 | MobiDBLite | consensus disorder prediction | 639 | 653 | - | - | |
HCH11g0771 | 737 | MobiDBLite | consensus disorder prediction | 498 | 737 | - | - | |
HCH11g0771 | 737 | MobiDBLite | consensus disorder prediction | 610 | 632 | - | - | |
HCH11g0771 | 737 | Gene3D | - | 193 | 297 | - | - | |
HCH11g0771 | 737 | MobiDBLite | consensus disorder prediction | 692 | 737 | - | - | |
HCH11g0771 | 737 | Gene3D | - | 298 | 351 | IPR023408 | - | |
HCH11g0771 | 737 | SUPERFAMILY | Sm-like ribonucleoproteins | 283 | 353 | IPR010920 | - | |
HCH11g0771 | 737 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 723 | IPR045042 | - | |
HCH11g0771 | 737 | MobiDBLite | consensus disorder prediction | 509 | 530 | - | - | |
HCH11g0771 | 737 | Pfam | Mechanosensitive ion channel, beta-domain | 283 | 353 | IPR006685 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH11g0771 | 737 | MobiDBLite | consensus disorder prediction | 531 | 553 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0771 | HCH-Chr11:37272987 | HCH4g0275 | HCH-Chr4:1762551 | 1.90E-200 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0771 | K22047 | - | csv:101217250 | 1002.66 |