Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0777 ATGGCAACAACAACAACAACCAAAGAGAAAGAGACAGTTTGTGTAACAGGAGCAAACGGATTCATCGGATCATGGGTAATCAAAACTCTCTTAAACCACGGTTACGCCGCCATTAACGCCACCGTCTTCCCCGGCTCCGACACTTCCCATTTACTCCATCTCCAAGCCACCATAAACCCTCATGCAACCATTAACGTTTTCGAAGCTAACGTTGTAGACAGTGAGGCAGTGTCTAAGGCTGTGGAAGGCTGTAATGGCGTTTTCCATATAGCATCGCCATGCACGTTGGAGGAGCCTGATGATCCGTTGAAAGAGTTGGTGGAGCCTGCCGTGGAAGGAACTGTTAATGTTCTTAACGCTGCTTTGAAGTTTGGCGTTAGACGTGTGGTTATTACTTCTTCTATTTCGGCTCTTGTTCCTAATCCTGGTTGGACGTCGGATAAGGTTTTTGATGAGACGTCTTGGACGGATTTGGATTATTGTAAATCTCATCAGAAATGGTATCCAGTGTCAAAGACATTGGCAGAGAAAGCAGCTTGGGAGTTTGTAGAGAAGCATGGACTTGATGTAGTTTCCATCCTTCCAGCCACTTGTCTTGGCCCACTTCTGCAGCCTAATCTGAATGCAAGTTGTGCTGTATTGCAGCAGTTGCTGCAGGGATCAAAGGATAGTCAAGAGTATCACTGGCTGGGAGCTGTTCATGTCAAAGATGTTGCTAAAGCACATGTTTTATTGTTTGAGTCTCCCACTGCATCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTGCTGGTTTTGCAGACAGAGTTTCCAAAATCTACCCTGAATTTCCAGTTCACAGGTTTTGTGGGGAAACACAGCCAGGATTGGTTGCCTGCAAAGATGCAGCCAAGAGGCTAATTGATCTGGGACTCGTCTTCTCCCCTCTTGAAGTTGCCATTCGTGATACGGTTGAAAGCCTTAGAAGTAAAGGCTTTCTGGAGCAGGGAGGGAGTCGCTGA 1005 46.07 MATTTTTKEKETVCVTGANGFIGSWVIKTLLNHGYAAINATVFPGSDTSHLLHLQATINPHATINVFEANVVDSEAVSKAVEGCNGVFHIASPCTLEEPDDPLKELVEPAVEGTVNVLNAALKFGVRRVVITSSISALVPNPGWTSDKVFDETSWTDLDYCKSHQKWYPVSKTLAEKAAWEFVEKHGLDVVSILPATCLGPLLQPNLNASCAVLQQLLQGSKDSQEYHWLGAVHVKDVAKAHVLLFESPTASGRYLCTNGIYQFAGFADRVSKIYPEFPVHRFCGETQPGLVACKDAAKRLIDLGLVFSPLEVAIRDTVESLRSKGFLEQGGSR 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 37447691 37451256 - evm.model.ptg000004l.604 HCH11g0777 554244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0777 334 FunFam Cinnamoyl-CoA reductase 1 6 333 - -
HCH11g0777 334 Pfam NAD dependent epimerase/dehydratase family 13 251 IPR001509 -
HCH11g0777 334 CDD FR_SDR_e 13 306 - -
HCH11g0777 334 Gene3D - 2 333 - -
HCH11g0777 334 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 321 IPR050425 GO:0016616(PANTHER)
HCH11g0777 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 323 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0777 HCH-Chr11:37447691 HCH3g1469 HCH-Chr3:52735243 3.00E-84 dispersed
HCH11g0777 HCH-Chr11:37447691 HCH4g1266 HCH-Chr4:8712495 2.40E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0777 - - - 0.0