Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0809 | ATGGCTTTGGTTTTGCACTCTTGGAAGTCTAACAAAAATGCTTTCAAGGCTCTCATAGCTGCCGAATACAATGGTGTCAAAGTTGACATTCCTGAAGATTTTACAATGGGCGTGTCCAATAAAACACCTGAGTTTATCAAGATGAATCCAATTGGAAAGGTTCCTGTGCTGGAAACGCCCGATGGTGCTGTCTTCGAGAGCAATGCTATAGCTCGCTATGTTACTCGCTTGAAGGACAATGGTTTATATGGCTCTTCTTTGATTGATTATGCTCATATTGAACAGTGGATTGATTTCGCCTCATTGGAAATTGATGTTCAACTTGGGAACATAATTTATCCTAGATTGGGATATCGTGCTTACCTTCCTCCTGTCGAGGAAGCTTCAATCTCTGCATTAAAAAGAGCTCTCGTTGCTTTGAACACCCATCTTGCTTCAAACACTTACCTTGTTGGGCATTCTGTGACACTTGCTGACATTGTTTTGACAAGTAACCTGTATTTGGGATTTACTGTGTACTTGACAAAAAGCTTTACCTCTGAGTTCCCTCATGTTGAGAGGTACTTCTGGACATTGGTCAATCAGCCAAATTTTAAAAAGATAATTGGTGAGGTGAAGCAGGCAGAATCTATTCCACCAGTTCAGTCTTTGAAAAAACCCCAGCCTCAAGAGGCTGCCAAACCAAAACCGAAGGATGAGCCCAAAAAAAAGGAAGAGAAGCCTAAAGTAGAAGCGGGCGGGGAAGAGGAGGCACCAAAGCCTAAGGCTAAGAACCCTCTTGACCTGCTTCCTCCTAGTAAGATGATTTTGGATGACTGGAAACGTCTCTATTCTAACACCAAGACTAACTTCCGTGAGGTTGCTATTAAAGGATTTTGGGACATGTATGATCCAGAAGGGTACTCCCTTTGGTTCTGTGACTACAAGTACAACGAGGAGAATACAGTTTCGTTTGTGACACTGAACAAGGTTGGTGGATTTCTGCAGAGAATGGATCTGGCCCGTAAATATGCTTTCGGAAAGATGCTAGTAATTGGATCAGAGGCACCATTTAAAGTGAAGGGACTATGGCTGTTCCGTGGACAAGAGATCCCGAAATTCGTAATGGACGAGTGCTACGATATGGAACTTTACGAGTGGACAAAGGTCGACATCTCTGATGAAGCCCAGAAGGAGAGGGTGAGCCAGATGATTGAAGACCAAGAACCATTCGAGGGAGAAGCTCTTTTGGATGCCAAATGCTTCAAGTGA | 1251 | 43.33 | MALVLHSWKSNKNAFKALIAAEYNGVKVDIPEDFTMGVSNKTPEFIKMNPIGKVPVLETPDGAVFESNAIARYVTRLKDNGLYGSSLIDYAHIEQWIDFASLEIDVQLGNIIYPRLGYRAYLPPVEEASISALKRALVALNTHLASNTYLVGHSVTLADIVLTSNLYLGFTVYLTKSFTSEFPHVERYFWTLVNQPNFKKIIGEVKQAESIPPVQSLKKPQPQEAAKPKPKDEPKKKEEKPKVEAGGEEEAPKPKAKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPKFVMDECYDMELYEWTKVDISDEAQKERVSQMIEDQEPFEGEALLDAKCFK | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 38510625 | 38513391 | + | evm.model.ptg000004l.572 | HCH11g0809 | 554276 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0809 | 416 | Pfam | Glutathione S-transferase, C-terminal domain | 127 | 196 | IPR004046 | - | |
HCH11g0809 | 416 | SFLD | Glutathione Transferase (cytosolic) | 3 | 189 | IPR040079 | - | |
HCH11g0809 | 416 | CDD | GST_N_EF1Bgamma | 3 | 77 | - | - | |
HCH11g0809 | 416 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 256 | 416 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH11g0809 | 416 | SUPERFAMILY | eEF1-gamma domain | 257 | 416 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH11g0809 | 416 | Gene3D | - | 79 | 214 | - | - | |
HCH11g0809 | 416 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 256 | 416 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH11g0809 | 416 | FunFam | Elongation factor 1B gamma | 1 | 74 | - | - | |
HCH11g0809 | 416 | SUPERFAMILY | Thioredoxin-like | 2 | 79 | IPR036249 | - | |
HCH11g0809 | 416 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
HCH11g0809 | 416 | MobiDBLite | consensus disorder prediction | 212 | 263 | - | - | |
HCH11g0809 | 416 | MobiDBLite | consensus disorder prediction | 224 | 256 | - | - | |
HCH11g0809 | 416 | FunFam | Elongation factor 1 gamma | 79 | 215 | - | - | |
HCH11g0809 | 416 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 75 | IPR004045 | - | |
HCH11g0809 | 416 | FunFam | Elongation factor 1-gamma 1 | 256 | 416 | - | - | |
HCH11g0809 | 416 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 86 | 214 | IPR010987 | - | |
HCH11g0809 | 416 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 416 | IPR044628 | GO:0004364(InterPro) | |
HCH11g0809 | 416 | SUPERFAMILY | GST C-terminal domain-like | 73 | 213 | IPR036282 | - | |
HCH11g0809 | 416 | SMART | EF1G_2 | 255 | 363 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH11g0809 | 416 | Pfam | Elongation factor 1 gamma, conserved domain | 255 | 363 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH11g0809 | 416 | SFLD | Main (cytGST) | 3 | 189 | - | - | |
HCH11g0809 | 416 | CDD | GST_C_EF1Bgamma_like | 89 | 209 | - | - | |
HCH11g0809 | 416 | Gene3D | Glutaredoxin | 1 | 74 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0809 | HCH-Chr11:38510625 | HCH12g1554 | HCH-Chr12:42179859 | 4.80E-188 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0809 | K03233 | - | vvi:100246571 | 660.603 |