Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0829 ATGACTGCCTCGTACTCCAATGGCGGTATGGGGAATGGTAATGTGTTTGGTTTTATTCATCAAGTGATCGTGGGGCGGTGGTTCTCGGTTTTCGGTTCTTTTCTCATCATGACAGGAGCTGGAGGAACTTACCTTTTTGCTTACTTCTCCAAAGACATCAAAGCAATACTGAAATGCGACCAGACAACCTTAAACATGATCGGTTTTTACAAAGACCTCGGAGCAAATGTCGGCATTAACTCCGGCCTATTGGGAGAGGTGGCTCCAACATGGTTCGTGCTCCTCGTCGGTGCGGTCTTGAACTTCGTTGGTTACTTCAAGATATGGCAGGCCGTCAGCGGAAAGATTGCGAAGCCGACGGTTGGTTTCATTTGTTTTTACATATTAGTTGGAGCAAACTCTCAGAATTTCGCCAATACAGGAGTCATTGTGACCTGTGTCAAGAATTTCCCGGAAAGGAGAGGGGTGCTGTTGGGCTTGTTGAAGGGTTTTGTGGGACTTAGTGGAGCTATAATGACACAAATTTACTTGGCAATTTATGGAAAAAATTCTAAATCTCTTGTTCTTCTCATTGCCTGGCTGCCTAGTTTGATTTCTTTGGTGTTTGTTTATTCGGTCAAGGAAATTAAATCTGAAAAACACCCGAATGAATTCCGAGTTTTCTATCAATTCCTCTCGGTCGCCATTGTTCTAGCTCTTTTTTTGACGGCGTTAATCTTTCTTCAGAGACAAACTCCTTTCAGTCACTCGGGTCATGTTGCTAGTGTAATTGGTATCATGGCTTTGCTTGGTCTTCCGTTGTTGATTGCCGTGAGAGAAGAATTGGTTCTTTGGAATCTAAAGAAAAAGCCTGTCAATGGTTTCACAAGAATAAGAATAGATAAAACACCACCTCCTCAAATGCAACCACACTCATATTCCTCTTCTGCATTACAAGAACCAAACGAGGAGGGACACAAAAAGTCCTTTTTTTCTGATATTTTCAACAAACCAGAAAGAGGAGAAGATTACTCGATAATGCAAGCGGTTCTCAGCATCGACATGCTCCTTATATTCATCACTACGCTAATCGGGGTCGGATCGAACCTGACCGCTATCGACAATCTAGGCCAAATTGGAGAGTCCCTCAGTTACCCACCTGAAACAATAAGCTACTTCCTCTCTATAGTAAGCATATTCAACTTCTTCGGCAGAATATTTTCTGGTTTTGTTTCAGAAATCCTACTAGCAAAACATAATTTTCCAAGGCCATTGATGGTAACTCTAGTCCTCTTAGTTGCCTGCATAGGCCACCTAGTGATAGCCTTCCCGTTCAGCAACTCGCTCTACATCGCCTCGGTGATCATCGGATTCACATTAGGGTCTCAAGTTCCATTGCTATTTGCAATAATCTCAGAGCTTTTTGGGCTAAAACACTACTCCTTGTTATTCAACTGTGGACAATTAGCATGTCCTATTGGATCATACGTTCTGAATGTGATGGTAACCGGCAGGCTTTACGACGAGGGAGCGAGGATGGTAAAGAGAGGAGATGGTAAGTTTGAGTTAACTTGCGTAGGACATCATTGCTACGATACATCATTCAAAATATTGGCAGCTCTGACGTTGCTTGGAGCTTTGATATCAATGGTTTTGGTGAAGAGGACAAGCGAGTTTTATAGAGGAGATATATATAAGAAGTTCGCAGAAGATATGGATACTTTGAAGACAGAAGTCCAGTTTTATCCCGTTGAGGAGAAGAAGATGAGAATTGGGAATTTATTGGTTGATAAACATAATATTAATTTCATGAGGTGA 1797 42.07 MTASYSNGGMGNGNVFGFIHQVIVGRWFSVFGSFLIMTGAGGTYLFAYFSKDIKAILKCDQTTLNMIGFYKDLGANVGINSGLLGEVAPTWFVLLVGAVLNFVGYFKIWQAVSGKIAKPTVGFICFYILVGANSQNFANTGVIVTCVKNFPERRGVLLGLLKGFVGLSGAIMTQIYLAIYGKNSKSLVLLIAWLPSLISLVFVYSVKEIKSEKHPNEFRVFYQFLSVAIVLALFLTALIFLQRQTPFSHSGHVASVIGIMALLGLPLLIAVREELVLWNLKKKPVNGFTRIRIDKTPPPQMQPHSYSSSALQEPNEEGHKKSFFSDIFNKPERGEDYSIMQAVLSIDMLLIFITTLIGVGSNLTAIDNLGQIGESLSYPPETISYFLSIVSIFNFFGRIFSGFVSEILLAKHNFPRPLMVTLVLLVACIGHLVIAFPFSNSLYIASVIIGFTLGSQVPLLFAIISELFGLKHYSLLFNCGQLACPIGSYVLNVMVTGRLYDEGARMVKRGDGKFELTCVGHHCYDTSFKILAALTLLGALISMVLVKRTSEFYRGDIYKKFAEDMDTLKTEVQFYPVEEKKMRIGNLLVDKHNINFMR 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 38907697 38909493 - evm.model.ptg000004l.552 HCH11g0829 554296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0829 598 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 561 - GO:0016020(PANTHER)
HCH11g0829 598 SUPERFAMILY MFS general substrate transporter 32 268 IPR036259 -
HCH11g0829 598 Gene3D MFS general substrate transporter like domains 344 553 IPR036259 -
HCH11g0829 598 Pfam Major Facilitator Superfamily 352 549 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
HCH11g0829 598 Pfam Nodulin-like 26 270 IPR010658 -
HCH11g0829 598 SUPERFAMILY MFS general substrate transporter 221 550 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0829 HCH-Chr11:38907697 HCH3g1194 HCH-Chr3:43095376 1.00E-271 dispersed
HCH11g0829 HCH-Chr11:38907697 HCH1g0699 HCH-Chr1:55838358 6.70E-159 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0829 - - - 0.0