Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0841 ATGGGTGGAGAGTTAGAACAAGGAAGATCGCTGGCTGAGACTCCCACTTATTCAGTTGCTTCTGTTGTTACAGTCATGGTTTTCGTTTGCTTTGTGGTGGAGAGGGCAATCTATAGATTTGGAAAGTGGTTGAAGAAGACTAAGAGAAAGGCTCTGTTTGCTTCTTTGGAGAAAATCAAGGAAGAGCTAATGCTGCTTGGACTTATATCTTTAATGCTGGCACAATGCGCAAGGGGGATCTCCGAAATTTGCGTGAACTCTTCCCTTTTCACCAGCCGATTCTATATTTGTTCTGAAGAAGATTATGCCATCACTGAGCATGTATGGCTTAAAAGTTCTTTTTTATCTCCTAATGAAACTGACATTCCTCCAAAAGGATTGAACACGATTCCTCATCAATGTGGCGAGGGTCGTGAGCCTTTTGTTTCATACGAGGGGCTCGAACAACTCCATCGCTTCCTGTTCGTTCTCGGGATCATACATGTTCTTTATAGTTGTCTGGCAGTCGGTCTGGCCATGAGTAAGATTTACAGCTGGAAGAAATGGGAAAATCAAATTATATTAGCTGCTGAAGAAAATTTGCCAGCTAAGAAAAGCAAAGTGATGAGACGGCAAACGACGTTTGTATTCCATCACACATCTCATCCATGGAGCAGGAGCCGTGTTCTCATTTGGATGCTTTGTTTTTTCCGTCAATTCAAGAGTTCGATAAGGAAATCAGACTACTTAGCCCTCCGTTTGGGATTCATTACTAAGCACAGGCTACCGATCTCTTATAATTTTCACAAGTATATAATTCGGAGCATGGAAGACGAGTTTCATGGAATTCTTGGAATTAGTTGCCCTCTTTGGGGCTATGCCATTCTATGCATCTTCATTAACATTCATGGTCTAAATATCTACTTTTGGCTTTCTTTCATACCAGCTGCACTTGTTATGTTGGTGGGGACAAAACTTCAGCACGTAGTCTCCTCTTTAGCACTTGAAATTGTGGAACAAACAGGTCCAGTAATTGGAAATCAAATAAAACCACGTGATGATTTGTTTTGGTTTGGAAAGCCTGAGATATTGCTACGGTTAATACAGTTCATCATATTTCAGAATGCATTTGAGATGGCAACATTTATCTGGTCCTTGTGGGGGTTTAAGGAGAGATCTTGCTTCATGAAGAACGATTTTATGATAATTACAAGATTGACGTCCGGTGTTCTTGTTCAGTTTTGGTGCAGCTACAGCACAGTGCCACTTAATATAATTGTTACACAGATGGGATCTAGGTGTAAGAAAGCTTTAGTTTCCGAGAGTGTGAGAGATTCACTTCACAGTTGGTGCAAGAGAGTGAAAGAGAGGTCTAAACGTGACTCTGCATTGTCTGTTACAACAAGATCAGTATGTTCACTGGAATCGACAATTGACGGGAGAGACGAGATCACGGTTGCATCCGGTACCTTATCACGGAGCATATCGTTGGACTCTCCAAACCAGGTGACGATACAATCATCGGATCAATTGGAGGCCATTGTTGAGTCTTCAAGCTTACATAATAAGCAGGAAGTCTCCCTCCATGCAGCGGAGTACTTATCGGAACCTCGAAGCGTTTCTCATGTTCTTGCTAGCAACCAAGAGAATAATGTAGAAAGCAGAGAAGACATCAAAGTTGAGACTCTCTTAGACTTGTTTCAGAGGACATGA 1692 41.78 MGGELEQGRSLAETPTYSVASVVTVMVFVCFVVERAIYRFGKWLKKTKRKALFASLEKIKEELMLLGLISLMLAQCARGISEICVNSSLFTSRFYICSEEDYAITEHVWLKSSFLSPNETDIPPKGLNTIPHQCGEGREPFVSYEGLEQLHRFLFVLGIIHVLYSCLAVGLAMSKIYSWKKWENQIILAAEENLPAKKSKVMRRQTTFVFHHTSHPWSRSRVLIWMLCFFRQFKSSIRKSDYLALRLGFITKHRLPISYNFHKYIIRSMEDEFHGILGISCPLWGYAILCIFINIHGLNIYFWLSFIPAALVMLVGTKLQHVVSSLALEIVEQTGPVIGNQIKPRDDLFWFGKPEILLRLIQFIIFQNAFEMATFIWSLWGFKERSCFMKNDFMIITRLTSGVLVQFWCSYSTVPLNIIVTQMGSRCKKALVSESVRDSLHSWCKRVKERSKRDSALSVTTRSVCSLESTIDGRDEITVASGTLSRSISLDSPNQVTIQSSDQLEAIVESSSLHNKQEVSLHAAEYLSEPRSVSHVLASNQENNVESREDIKVETLLDLFQRT 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 39204302 39209825 + evm.model.ptg000004l.540 HCH11g0841 554308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0841 563 PANTHER MLO-LIKE PROTEIN 1 1 520 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH11g0841 563 Pfam Mlo family 8 477 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0841 HCH-Chr11:39204302 HCH13g1347 HCH-Chr13:41357086 2.20E-143 dispersed
HCH11g0841 HCH-Chr11:39204302 HCH2g1166 HCH-Chr2:54237510 1.20E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0841 K08472 - csv:101204236 914.064