Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0893 ATGGGAATTTTCGCTAATCAAAGAGGATCGAATTCGAGATCAGGGATGGCGGCGGATGAGCTGCCGTTATCAAATGCGGCGGTTCCTATTCATACGAAGAAAAAATGGGCAAATGCAATGCCTTTTTTCATTGCCCTAGTGGTTATAGCTGAGATTGTATTTCTGGGTAGGCTTGATGTGGCCAAGAATGTAGCTTTGGTGGATACATGGGCCGACTTGTTCTACCGGTCGTCGCCTTCTCCGGCACTGATCGACGGGGTTGATGATTTGAATTCTCGATTTCTCGGCGGTGACCGGGGTTCGGAATTGGAGAGTTGTGAGGCGTGGTTGGAGAAAGAGGATGCTGTTGTGTACTCCAGGGATTTTCAAAAGGAGCCTGTCTTGGTTTCTGGTGCTGATGAGGCATGGAGATCTTGTGCTGTAGGATGTGAATTTGGGTCTAATCCAAGCCCTGATGCCGCATTTGGGTTAAATCACCCGAGTGGAATTGCCTCAATTCTTCGCTCTATGGAATCATCTCAATATTATGCAGAGAACAATATTGCTCAGGCACGACGGAACGGCTATAATGTTGTAATGACCACTAGTCTTTCATCAGATGTACCTGTTGGATACTTTTCTTGGACTGAGTATGACATTATGGCTCCAGTGCAGCCAAAGAATGAAAGTGCCCTTGCAGCTGCTTTCATTTCAAATTGTGGTGCTCGTAACTTCCGCATCGAAGCTCTTGAGGCCCTAGAAAAGTTGAACGTCACAATAGATTCATATGGTGGATGCCACAGAAATCGTGATGGAAGTACAGTGGATAAATTGGAGACTCTAAAGCGCTATAAATTCAGCTTGGCTTTTGAGAATTCCAACGAGGAAGATTATGTGACTGAAAAATATTTCCAATCTCTGGTTGCCGGAACTGTTCCTGTGGTCATTGGTGCTCCAAATATTCTAGAATTTGCTCCTTCAAAGGCTTCACTTTTGCATATCAGGGAGCTTTCAGATGTGAAGTCAGTTGCCGATGCTATGAAGCACCTTGCAGAAAATTCTGATGCATTCAACAAGTCTTTGAGGTGGAAATATGAGGGTCCATCTGATTCTTTCAAGGCACTGTTGGATATGGCAGCAGTTCATTCATCATGTCGCCTTTGTATTCATTTAGCAACTGATATTCACGAGAGAGAAGAAAAGGACGCAGGTTTCCAAAAGCGTCCTTGTAAGTGCACCAGAGGTTTGGAGAGTGTTTATCATTTATATGTAAGAGAAAGAGGAAGGTTTAATTCGGAGTCCATTTTCTTGAGGTCTGGGAATTTAACCGTTGAAGAATTGGCGTCAGCAGTGCTCGAGAAGTTCAATTCTCTGAAGCACGAACCGGTGTGGAAGAATGAAAGACCGAAAAGCATAAGAGGGGATGGATTAAGGTTGTACAAAATATACCCAGTTGGGTTGACACAGAGGGAAGCTTTATATACCTTCAATTTTAAAGGGGATTCTGATCTTAGAAGGTATGTGGAAGATAACCCATGTGCCAAATTTGAAGTCATATTTGTATAG 1545 43.62 MGIFANQRGSNSRSGMAADELPLSNAAVPIHTKKKWANAMPFFIALVVIAEIVFLGRLDVAKNVALVDTWADLFYRSSPSPALIDGVDDLNSRFLGGDRGSELESCEAWLEKEDAVVYSRDFQKEPVLVSGADEAWRSCAVGCEFGSNPSPDAAFGLNHPSGIASILRSMESSQYYAENNIAQARRNGYNVVMTTSLSSDVPVGYFSWTEYDIMAPVQPKNESALAAAFISNCGARNFRIEALEALEKLNVTIDSYGGCHRNRDGSTVDKLETLKRYKFSLAFENSNEEDYVTEKYFQSLVAGTVPVVIGAPNILEFAPSKASLLHIRELSDVKSVADAMKHLAENSDAFNKSLRWKYEGPSDSFKALLDMAAVHSSCRLCIHLATDIHEREEKDAGFQKRPCKCTRGLESVYHLYVRERGRFNSESIFLRSGNLTVEELASAVLEKFNSLKHEPVWKNERPKSIRGDGLRLYKIYPVGLTQREALYTFNFKGDSDLRRYVEDNPCAKFEVIFV 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 39878831 39882910 + evm.model.ptg000004l.488 HCH11g0893 554360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0893 514 Gene3D - 167 364 IPR038577 -
HCH11g0893 514 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 66 486 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
HCH11g0893 514 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 222 389 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
HCH11g0893 514 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 117 388 - -
HCH11g0893 514 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 171 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0893 HCH-Chr11:39878831 HCH7g0644 HCH-Chr7:6472924 1.40E-205 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0893 K00753 - csv:101202837 801.971