Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0898 ATGGCCACCAGTGAGGAGCAGCAAAACCAGGCAGGAAGGCACCAAGAAGTTGGCCATAAAAGCCTTCTGCAAAGTGATGCTCTTTACCAGTATATTTTGGAGACGAGCGTGTACCCCAGAGAGCCAGAATCCATGAAGGAACTCAGAGAATTAACAGCCAAGCATCCATGGAATATAATGACAACATCAGCCGATGAAGGGCAGTTCTTGAACATGCTGTTGAAGCTGATCAACGCCAAGAATACCATGGAGATCGGCGTCTACACCGGCTACTCCCTCCTCGCCACCGCCCTCGCCCTCCCCGACGACGGAAAGATTTTGGCAATGGATATAAACAAAGAAAATTACGAACTTGGGCTTCCGGTGATTCAGAAAGCCGGCGTTGCTCACAAGATTGAATTCAAAGAAGGCCCCGCTCTCCCTATTCTCGATGACCTCGTCGCCGATGAGAAAAACCATGGGACCTACGACTTCATCTTCGTGGACGCTGATAAAGACAACTACATAAACTATCACAAGAGATTGATTGACCTGGTCAAAGTTGGGGGAGTAATCGGGTACGACAACACCCTATGGAACGGCTCCGTCGTGGCACCACCTGATGCGCCCTTGCGCAAATACGTTCGATACTACAGAGACTTTGTGGTGGAGCTCAATAAAGCTCTCGCTCTGGACCCTAGGATTGAAATCTGCATGCTCCCTGTTGGTGATGGGATCACTATCTGCCGTCGGATCAAATGA 741 49.66 MATSEEQQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINKENYELGLPVIQKAGVAHKIEFKEGPALPILDDLVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVVELNKALALDPRIEICMLPVGDGITICRRIK 246
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 39949446 39952465 + evm.model.ptg000004l.483 HCH11g0898 554365
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0898 246 Gene3D Vaccinia Virus protein VP39 20 246 IPR029063 -
HCH11g0898 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171(InterPro)
HCH11g0898 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171(InterPro)
HCH11g0898 246 PANTHER O-METHYLTRANSFERASE-RELATED 18 245 IPR050362 GO:0008757(PANTHER)
HCH11g0898 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
HCH11g0898 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0898 HCH-Chr11:39949446 HCH14g0292 HCH-Chr14:31421691 3.30E-104 dispersed
HCH11g0898 HCH-Chr11:39949446 HCH7g0642 HCH-Chr7:6385283 6.80E-134 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0898 K00588 - csv:101205648 467.618