Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g0951 | ATGGCTACTTCTTTGCTTCTCCGATCTCTACGACGTCGCGATGTTACTTCTTCCTCTATCTCTGCTTTCCAATCCTTAACCAATACAAAATCGTCATGGGCAAACTCTCGTCTTGGTCAATCATGGGCAAATTTATCAAGGCCATTTAGTTCAAAACCGGCTGGGAATGATGTGATCGGTATTGATTTGGGTACCACGAATTCTTGTGTTGCTGTCATGGAAGGAAAGAATCCCAAAGTTATTGAAAACTCTGAAGGAGGTAGGACTACACCATCAGTTGTCGCGTTTAATCAGAAAAGTGGATTACTTGTAGGAACACTTGCGAAGAGACAAGCTGTGACAAATCCCACTAATACTGTGTTTGGTACAAAGCGTCTAATTGGAAGACGTTTTGATGATCCTCAAACACAAAAGGAAATGAAGATGGTGCCCTACAAAATAGTCAAAGCTCCAAATGGGGATGCTTGGGTAGAGGCAAATGGGCAGCAATATTCACCCAGTCAAATTGGTGCTTTTGTTTTAACAAAAATGAAAGAGACTGCAGAGGCATATCTTGGAAAGGCTGTATCAAAGGCTGTGATTACTGTTCCAGCTTATTTCAACGATGCACAGAGACAAGCAACAAAGGATGCTGGAAGGATTGCTGGTCTTGATGTTCTTAGAATTATCAATGAACCCACTGCTGCTGCCCTTTCTTATGGAATGAATAATAAGGAGGGTCTTATTGCAGTTTTTGATCTTGGTGGCGGAACGTTTGATGTTTCCATTTTGGAGATATCTAACGGTGTGTTTGAGGTAAAAGCAACAAATGGTGACACATTTTTGGGTGGAGAGGATTTTGATAATACATTGTTGGACTTTCTAGTGAAGGAGTTCAAAAAAACTGAGGGAATCGATCTCAGTAAGGACAAGTTAGCCTTGCAAAGGCTTAGAGAGGCTGCTGAAAAGGCAAAGATTGAATTATCATCTATGCCACAAACCGAAATTAACCTACCTTTTATTACTGCCGATTCATCTGGTCCAAAACATTTGAATATTACTCTGACTAGGTCAGAGTTTGAGAGGCTAGTTAGTGAACTTATTGAAAGGACCAAGGCCCCATGTAAAAGCTGTTTGAAGGATGCCAACATTTCTGCCAAAGATGTGGATGAAGTGCTTTTAGTTGGAGGAATGACTCGTGTCCCCAAAGTGCAAGAAGTTGTCACTGAAATATTTGGAAAGAGTCCTAGTAAAGGAGTGAATCCTGACGAGGCGGTTGCCATGGGAGCTGCAATTCAGGGTGGCATTCTCCGTGGTGATGTCAAGGAATTGCTTCTTCTAGATGTCACCCCACTGTCCCTTGGTATTGAGACGCTTGGTGGCATCTTTACAAGGTTGATCGGCCGGAACACTACAATTCCAACTAAGAAGAGTCAGGTGTTCTCAACTGCTGCTGACAATCAGACTCAGGTTGGTATCAAGGTGTTGCAAGGTGAGCGGGAAATGGCTGCCGACAACAAGATCTTAGGAGAATTCGAGCTAGTTGGAATTCCTCCATCTCCAAGAGGATTGCCTCAGATTGAGGTTGCATTTGACATTGATGCCAATGGTATTGTGACCGTCTCTGCCAAGGACAAGTCCACTGGTAAAGAGCAACAAATAACCATCCGATCTTCTGGAGGGCTCTCAGAAGATGAAATCGAGAAGATGGTCAAGGAAGCAGAAATGTTCGCTCAAAAGGATCAAGAGAGGAAGGCTCTGATTGACCTCAGAAATAGTGCAGATACTACCATCTACAGTATTGAGAAGAGCTTGGCAGAATATAGGGAGAAGTTACCAAGCGAAGTTGCAAAAGAAATAGAGGATGCAGTGGCAGACTTGAGGAATTCAATGTCAGGGGATAACATTGAAGAAATTAAGTCAAAACTCGACACCGCGAACAAAGCCGTGTCAAAGATCGGGCAACATATGGCTGGTGGTTCCGGCGGTGGTGATCAATCTGGTGGATCACAAGGGGGTGAACAGGCTTCAGAAGCCGAGTATGAAGAAGTGAAGAAGTGA | 2040 | 43.38 | MATSLLLRSLRRRDVTSSSISAFQSLTNTKSSWANSRLGQSWANLSRPFSSKPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENSEGGRTTPSVVAFNQKSGLLVGTLAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKAVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLDFLVKEFKKTEGIDLSKDKLALQRLREAAEKAKIELSSMPQTEINLPFITADSSGPKHLNITLTRSEFERLVSELIERTKAPCKSCLKDANISAKDVDEVLLVGGMTRVPKVQEVVTEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLIGRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKILGEFELVGIPPSPRGLPQIEVAFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIEKMVKEAEMFAQKDQERKALIDLRNSADTTIYSIEKSLAEYREKLPSEVAKEIEDAVADLRNSMSGDNIEEIKSKLDTANKAVSKIGQHMAGGSGGGDQSGGSQGGEQASEAEYEEVKK | 679 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 40906720 | 40909737 | - | evm.model.ptg000004l.430 | HCH11g0951 | 554418 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g0951 | 679 | FunFam | Chaperone protein HscA homolog | 241 | 298 | - | - | |
HCH11g0951 | 679 | Gene3D | - | 59 | 427 | - | - | |
HCH11g0951 | 679 | Hamap | Chaperone protein DnaK [dnaK]. | 55 | 677 | IPR012725 | GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro) | |
HCH11g0951 | 679 | Gene3D | - | 555 | 652 | IPR029048 | - | |
HCH11g0951 | 679 | NCBIfam | molecular chaperone DnaK | 58 | 650 | IPR012725 | GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro) | |
HCH11g0951 | 679 | Gene3D | - | 234 | 414 | - | - | |
HCH11g0951 | 679 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 58 | 613 | IPR013126 | GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0140662(InterPro) | |
HCH11g0951 | 679 | Pfam | Hsp70 protein | 58 | 650 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
HCH11g0951 | 679 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 385 | 399 | IPR018181 | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 436 | 455 | - | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 517 | 533 | - | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 108 | 116 | - | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 85 | 97 | - | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 192 | 212 | - | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 413 | 433 | - | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 250 | 260 | - | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 57 | 70 | - | - | |
HCH11g0951 | 679 | PRINTS | 70kDa heat shock protein signature | 382 | 398 | - | - | |
HCH11g0951 | 679 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 61 | 68 | IPR018181 | - | |
HCH11g0951 | 679 | FunFam | Molecular chaperone DnaK | 59 | 240 | - | - | |
HCH11g0951 | 679 | FunFam | Chaperone protein DnaK HSP70 | 426 | 609 | - | - | |
HCH11g0951 | 679 | FunFam | Molecular chaperone DnaK | 277 | 364 | - | - | |
HCH11g0951 | 679 | FunFam | Heat shock protein 9 | 121 | 172 | - | - | |
HCH11g0951 | 679 | Coils | Coil | 300 | 320 | - | - | |
HCH11g0951 | 679 | CDD | HSPA9-like_NBD | 55 | 430 | - | - | |
HCH11g0951 | 679 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 244 | 257 | IPR018181 | - | |
HCH11g0951 | 679 | Gene3D | Actin; Chain A, domain 4 | 277 | 364 | - | - | |
HCH11g0951 | 679 | SUPERFAMILY | Actin-like ATPase domain | 58 | 238 | IPR043129 | - | |
HCH11g0951 | 679 | FunFam | Molecular chaperone DnaK | 555 | 654 | - | - | |
HCH11g0951 | 679 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 432 | 588 | IPR029047 | - | |
HCH11g0951 | 679 | SUPERFAMILY | Actin-like ATPase domain | 239 | 430 | IPR043129 | - | |
HCH11g0951 | 679 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 430 | 554 | IPR029047 | - | |
HCH11g0951 | 679 | MobiDBLite | consensus disorder prediction | 643 | 679 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0951 | HCH-Chr11:40906720 | HCH4g1711 | HCH-Chr4:20792503 | 6.80E-192 | dispersed | |
HCH11g0951 | HCH-Chr11:40906720 | HCH13g0471 | HCH-Chr13:3261085 | 1.40E-157 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g0951 | K04043 | - | csv:101216102 | 1182.93 |