Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0967 ATGGCTGGTCAATCAGATCCTCACCTCACCCAATTTTCAGCCGAAGAGGTCGAGTTTGTAGCTGAAGATGAAATGGTGGAGATAGTTCCCAACATGAGAATGGATCCTCTCCATTTGATTTGCGGCGATTATGGTCCATTCTATCCACAATTAGCTGCTCAAGTTCCGTTATGGCTAGCAATTGCCATGAAGAAAAGAGGAAAATGTGCAATTAGGCCTCCTGAGTGGATGTCAGTTGAAAAGTTGACACAAATTTTGGAGGCAGAACGTGAGTCTGAAGGAGCTTTCCAGATAGTACCCTTCCATTATGTGGAAATATCAAAACTTCTTTTTGATCATGCACGAGATGACATTCCCGACGCGTATTTGGTGAGGTCTCTTGTTGAAGATATCAGGGATGTTAGGTTTCATAAAGTTGAAACCAGTTTAGAGTCAATTGATACTCGCACATCTGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAACATAGTTCGACCATTTGTTAGTAGAGCCTTGCAGGCAATCTACAAGCATGGGAATCCAGAGTTAGTCCCAGATCAAGAGAGGATGTCTAGTGTGCAGCCACAAGGACAGGATCGTGGACAAAGACGAGCTCTGCGGAGACGGTAG 636 44.03 MAGQSDPHLTQFSAEEVEFVAEDEMVEIVPNMRMDPLHLICGDYGPFYPQLAAQVPLWLAIAMKKRGKCAIRPPEWMSVEKLTQILEAERESEGAFQIVPFHYVEISKLLFDHARDDIPDAYLVRSLVEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVSRALQAIYKHGNPELVPDQERMSSVQPQGQDRGQRRALRRR 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41081480 41086403 - evm.model.ptg000004l.414 HCH11g0967 554434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0967 211 CDD GINS_B_Psf2 13 74 - -
HCH11g0967 211 FunFam DNA replication complex GINS protein PSF2 78 194 - -
HCH11g0967 211 Gene3D - 78 191 - -
HCH11g0967 211 CDD GINS_A_psf2 66 182 - -
HCH11g0967 211 Pfam GINS complex protein helical bundle domain 71 171 IPR021151 -
HCH11g0967 211 PIRSF GINS_PSF2 2 211 IPR007257 GO:0005634(InterPro)|GO:0006260(InterPro)
HCH11g0967 211 Gene3D - 12 77 - -
HCH11g0967 211 MobiDBLite consensus disorder prediction 185 211 - -
HCH11g0967 211 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 200 IPR007257 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)
HCH11g0967 211 SUPERFAMILY GINS helical bundle-like 73 182 IPR036224 -
HCH11g0967 211 FunFam DNA replication complex GINS protein PSF2 12 77 - -
HCH11g0967 211 SUPERFAMILY PriA/YqbF domain 12 71 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0967 K10733 - csv:101212053 362.844