Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0980 ATGGAGAGTTTTGCCCTTCAATCTCTTTCCCTTTCCACCACTTCTTCCTTTTCTCTCCATTCTCGCATCTCTCTCCTTCATCGCCCACGACCCATTTCTTCTTTTCCATCAATCTCCATTCCCAATTCACCGTTTCCCAATTCTCCAACTACCCTTCTCATTTCTCCACCTTTTCTTCATAACCCAATTGTGAAATCTCGTGGGGTGTTGTTGAAGATGAATTATTCTCAATCTCCGGATAGGGAAAATCAGATTCCGGCACCGCCGCCGCCACGAACCCGACCTCCCCGACAAGGAGCTAAACCAATCCCATTACTTGTTTCTGTTGCCATTGGGTTGATTGTTCGTTTTGCTGTCCCTAAACCAACTGATGTCACTTCTCAAGCTTGGCAATTGTTGTCGATTTTCCTTTCTACGATTGCCGGGCTCGTTTTGAGCCCGTTGCCGGTCGGGGCGTGGGCTTTTCTTGGTCTAACTGTGGCTGTTGTTACTAAGACATTGACGTTTGCTGCTGCTTTTAGTGCTTTTACTAGTGAGGTGATTTGGTTGATTGTTATTTCTTTCTTTTTTGCACGTGGGTTTGTGAAGACTGGATTAGGGGATAGGATTGCTACTTATTTTGTTAAGTGGATGGGGAAGAGTACGCTTGGATTGTCTTATGGATTGACAATTAGTGAGGCATTGATTGCCCCTGCAATGCCGAGCACGACTGCGAGAGCTGGCGGTGTGTTTTTGCCAATCATTAAGTCATTGTCGCTTGCTGCTGGGAGTAAACCGAAGGATCCTTCGGCGAAAAAGATCGGTGCTTATCTTGTTCAGTCTCAATTTCAGAGTGCCGGTAACTCTAGTGCCCTTTTCCTAACCGCTGCTGCTCAAAATATGTTGTGCCTTAAATTAGCTGAAGAACTTGGTGTACAAATATCTAGCCCCTGGCTTACTTGGTTCAAGGTTGCTAGTATTCCAGCAGCCGTCGGTCTTGCAGTGACTCCAGCAATCCTATACTATATTTTTCCTCCAGAAACCAAAGACACACCGGACGCCCCCGCCATGGCTACAAGAAAATTGGAGGCTATGGGTCCTGTCACGAAAAATGAATGGATCATGGTTGCTACTATGGTTCTTGCAGTCTCATTATGGATCGCTGGAGAGGCCCTCCACATACCCAGTGTTGTGGCTGCGATGATTGGCTTATCAGTTCTCCTTGTATTGGGAGTCCTTGATTGGGATGACTGCTTAGCCGAAAAGTCAGCCTGGGATACCTTGGCTTGGTTTGCTGTCCTCGTCGGCATGGCTGGCCAATTAACAAGTCTTGGTCTTGTGAGTTGGATGTCTACTTCTGTGGCCCATCTTCTCAAATCGCTCTCCCTGAGCTGGCCCATAACCTTTGTTATTCTTCAGGCAGCTTACTTCTTCATTCACTACCTCTTTGCTAGCCAAACAGGTCATGTTGGAGCTTTATATTCTGCATTCCTTGCTATGCACTTGGCTGCTAAGGTACCTGGTGTTTTGGCAGCTTTGGCCTTGGCTTACAACACAAATCTTTTTGGTGCTCTGACTCATTACAGTAGCGGCCAAGCGGCTGTTTACTATGGAGCTGGTTACGTCGAGCTACCCGACGTATTTAAAGTCGGGTTGATGATGGCAATTGTTAATGCTACTATTTGGGGTGTTGTTGGAGGTATTTGGTGGAAGATTCTGGGTCTATACTGA 1710 46.61 MESFALQSLSLSTTSSFSLHSRISLLHRPRPISSFPSISIPNSPFPNSPTTLLISPPFLHNPIVKSRGVLLKMNYSQSPDRENQIPAPPPPRTRPPRQGAKPIPLLVSVAIGLIVRFAVPKPTDVTSQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTVAVVTKTLTFAAAFSAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLAAGSKPKDPSAKKIGAYLVQSQFQSAGNSSALFLTAAAQNMLCLKLAEELGVQISSPWLTWFKVASIPAAVGLAVTPAILYYIFPPETKDTPDAPAMATRKLEAMGPVTKNEWIMVATMVLAVSLWIAGEALHIPSVVAAMIGLSVLLVLGVLDWDDCLAEKSAWDTLAWFAVLVGMAGQLTSLGLVSWMSTSVAHLLKSLSLSWPITFVILQAAYFFIHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVELPDVFKVGLMMAIVNATIWGVVGGIWWKILGLY 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41330124 41333982 + evm.model.ptg000004l.401 HCH11g0980 554447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0980 569 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 16 569 IPR030676 GO:0005215(PANTHER)
HCH11g0980 569 Pfam Sodium:sulfate symporter transmembrane region 104 568 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH11g0980 569 NCBIfam DASS family sodium-coupled anion symporter 120 563 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH11g0980 569 MobiDBLite consensus disorder prediction 83 98 - -
HCH11g0980 569 MobiDBLite consensus disorder prediction 78 98 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0980 HCH-Chr11:41330124 HCH2g1374 HCH-Chr2:55555405 5.40E-126 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0980 - - - 0.0