Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g0989 ATGGCGAATGATGATTTAGAAAGAAGCGATAACAATGGCTCAATGGATTCCATGGAATCGCGATGGGTTTTTCAAGATGAAGACGATTCGGAGATCGATGAGGACGAAGAAGGAGAAACGCGGAATCGGCCGGATTTGGAATCTGATGATGATGATAATGTTGAGCAAAGATTGATTCGGACTGGACCGCGTATTGATTCTTTCGATGTTGAAGCCCTAGATGTCCCTGGTGCTCATAGAAGTGATTATGAGGACTTCAGTGTGGGAAAGAAAATCGCTCTTGCTTTTCAGACCCTTGGGGTTGTATTTGGTGATGTTGGGACAAGCCCTCTATATACATTCAGTGTCATGTTTAACAAAGTTCCTATAAATGGAGATGAAGATGTTATTGGGGCGTTATCAATGGTCCTGTACACTTTAATCTTTATTCCCCTAATCAAGTATGTTCTTGTTGTGCTTTTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATCTGTAGGCATGCCAAGGTCAGTCTTCTCCCAAATCAACTTCCTTCGGATACTCGTATATCAAGCTTTAGGTTAAAGGTTCCATCTGCCGAACTGGAAAGATCACTGAAAATAAAAGAAAAACTTGAGGCTTCCTTGACTTTAAAGAAGCTTCTTCTGATGCTTGTTCTTGCTGGAACTGCTATGGTAATAGCTGATGGAGTTGTTACACCGGCAATGTCAGTTATGTCAGCTGTTGGTGGACTAAAGATCGGAGTGGATGCATTCAACAAAGATGAGGATGTGATGATATCAGTTGCCTGTATTATAATTTTGTTCAGCGTTCAAAAATATGGCACTAGTAAAGTGGGGCTTGCTGTTGGTCCTGCATTATTTATATGGTTTTGTACTCTTGCGGGCATTGGGATTTATAATCTTATCGTATATGATAGCAGTGTCTTGAAGGCATTTAATCCTATTCATATATATTACTTCTTCAAGAGGAACTCAACCAATGCATGGTACTGTCTTGGGGGCTGTCTTTTATGCGCAACAGGTTCCGAGGCAATGTATGCAGATCTCTGCTATTTCTCTGTGCGTTCTATACAGCTTACATTTGTGTTTCTCGTCTTGCCTTGTTTGTTTCTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAATCACAGTGGGGCCGAGCAAGTTTTCTTTAATTCTGTTCCAAAAAGTGCCTTCTGGCCAGTCTTTGTCATTGCTAATGTTGCTGCATTAATTGCTAGTCGGGCAATGACTACAGCTACATTTTCATGTATAAAACAATCAACAGCACTTGGTTGTTTTCCTCGTCTTAAGATCATTCACACATCTAGGAAATTCATGGGTCAAATCTATATCCCGGTGTTAAATTGGTTTTTGTTGGCAGTTTGCCTGGTGGTCGTTTGCACCATATCTAGCATGAATGAGATTGGAAATGCATATGGTATTGCGGAGCTTGGAGTGATGATGATGACGACGGTCTTAGTAACCATTGTTATGCTTCTTATATGGCAGATAAATATCTTCGCCGTCCTGAGTTTTGCAATTTTCTTTCTTGGGATAGAATTGATATTTTTCTCATCTGTGTTATGGAGTGTGGGTGATGGAAGTTGGATCATATTGGTCTTTGCAGTGATTATGTTCTTTATCATGTACATATGGAATTATGGAAGCAAGCTTAGGTATGAAACTGAAGTCAAGCAGAAGCTATCAATGGATTTAATGCGGGAACTCGGGTGCAATCTTGGAACAATCAGAGCTCCAGGCATTGGATTGCTCTACAATGAACTAGCGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACAACTCTTCCAGCAGTTCATTCGATGATCATATTTGTGTGTATCAAGTGTGTGCCAGTTCCTGTTGTGCCCCAGAGTGAGAGATTTCTTTTCCGTAGAGTCTGCCCAAAAAGCTATCACATCTTTCGTTGCATTGCCAGGTATGGTTACAAGGATGTTCGGAAAGAAAATCATCAGACATTTGAGCAGCTGTTGATTGAAAGCCTTGAGAAGTTCATCCGTCGAGAAGCACAAGAAAGGTCATTAGAGAGCGACGGAGATGATGATACAGATTCCGAGGAAGCCCATTGCTCTCGGGTCCTCATAGCTCCAAATGGGAGTGTCTATTCACTTGGTATTCCCCTCCTTGCTGAAATCAGTGATCCGATTAAACCCATGTCTGAAGTCTACATATCAGAAGAGGTGCAGCCAGAGCCATCTCCAGACCCCTCAATCCCAGATGCAGAGCAATCTCTTGAGAGAGAGCTTTCTTTTATACGCAAGGCTAAAGAATCAGGAGTAGTTTACCTTCTCGGTCATGGGGATATCAGGGCAAGGAAGGATTCTTGGTTTATCAAGAAGCTCGTGATAAATTACTTCTATGCTTTCTTAAGAAAGAACAGCAGGAGGGGGGTTTCTAATCTTAGTGTGCCCCATTCCCACCTGATTCAGGTTGGCATGCAATACATGGTTTAA 2523 41.66 MANDDLERSDNNGSMDSMESRWVFQDEDDSEIDEDEEGETRNRPDLESDDDDNVEQRLIRTGPRIDSFDVEALDVPGAHRSDYEDFSVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSMVLYTLIFIPLIKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTAMVIADGVVTPAMSVMSAVGGLKIGVDAFNKDEDVMISVACIIILFSVQKYGTSKVGLAVGPALFIWFCTLAGIGIYNLIVYDSSVLKAFNPIHIYYFFKRNSTNAWYCLGGCLLCATGSEAMYADLCYFSVRSIQLTFVFLVLPCLFLGYLGQAAYLISNHSGAEQVFFNSVPKSAFWPVFVIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCTISSMNEIGNAYGIAELGVMMMTTVLVTIVMLLIWQINIFAVLSFAIFFLGIELIFFSSVLWSVGDGSWIILVFAVIMFFIMYIWNYGSKLRYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELAKGIPAIFGHFLTTLPAVHSMIIFVCIKCVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDSEEAHCSRVLIAPNGSVYSLGIPLLAEISDPIKPMSEVYISEEVQPEPSPDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNSRRGVSNLSVPHSHLIQVGMQYMV 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41444472 41455845 + evm.model.ptg000004l.392 HCH11g0989 554456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g0989 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 79 840 IPR003855 GO:0000325(PANTHER)|GO:0005774(PANTHER)|GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
HCH11g0989 840 Pfam K+ potassium transporter C-terminal domain 595 838 IPR053952 -
HCH11g0989 840 MobiDBLite consensus disorder prediction 37 54 - -
HCH11g0989 840 Pfam K+ potassium transporter integral membrane domain 94 580 IPR053951 -
HCH11g0989 840 NCBIfam potassium uptake protein 94 840 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
HCH11g0989 840 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0989 HCH-Chr11:41444472 HCH4g0007 HCH-Chr4:70784 8.50E-253 dispersed
HCH11g0989 HCH-Chr11:41444472 HCH5g1145 HCH-Chr5:38196589 1.00E-181 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g0989 - - - 0.0