Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g1034 ATGAAAGATGTGTGGTACAACGGGAGTATCGGAAATTATCTTCTGAGATGGTATGCAAGCTATTCCAGAAGCGCAGATCAGATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGCAGAAGAAGAAGTTGCTGCAGAAGAGAGCCTGTCACTGTATTGCAAGCCTGTAGAACTCTATAACATTCTTCAACGCCGCGCTATTAATAATCCATTGTTTCTTCAAAGATGTTTAAGCTACAAAATAGAGACAAAACACAAGAAAAGGATCCAGATGGCAATTTCAATTACTAAGACTTTGAGTGGGGGTGGCCAGGCACATAACCTGTTTCCTTTGCAAGTCATTTTGGGAAGATTAATTTCTGACATTGCAGTTGCTGAGTTCTCTGGTGTGTATCGCTTCAGTCGAGCTTGCCTCATAACTGGCATCAACAGAGTTGAAGGAAACTCTCAGGTTATAGCAAATTTTATACTCCCTGAAATTAACAAGCTAGCTGTGGAGGCAAAATCTGGATCACTTGCTATATTATTTGTTAGCTGTGTTGGATCCCCTAATACTTTGTCCGGAGTAGATTCAATTGATGGGCCTTTGAATATGACATCTGTTCCTGTTGCAGGTTACTGCTTATGGGGCAAGATACCACTGGAATCACTGTACATTTCATGGCAGAATTCTTCGAACTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACTGTTGACATGCGTTCTTGTGTCCTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTGTAGCATTTCAAATTCCTCATAATTCTGATACTATGCATATAGCACAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCTTATGATTCTTACACATACAGTGATATACCTTCCTCATCATTATCTCATATGATTCGGTTGAGGGCAGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACAGAAGTAACTGAAGACTTTTCCTGCCCATTTTGTTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGACATCACTTGTTGTCATTACACGATCTCTTCAACTTTGAGTTTTGGGTAACTGAAGAATATCAAGCTGTAAATGTTTCAACAAAGACTGATATTTGGCGGTCTGAGATTATTGCAGATGGCATTGATCCAAAGCAACAAACATTTTTCTTCTGCTCAAGGCCTCTTAGGCGCAAAAAAGTGAAGAACCTTGTTCAAAATGCAAAGCACGCACATCCTTTTGTTGTAGACTCTGAGTTTTTAGACAAGGTGGATGATGCTCATTCTAGCAAAGGTGAAAAGGCTCAAATATCAGGTTTTTTAAGCTCCTCTCTGCATTCGTCCAATGATCCTGATTGCGTGCAATCTATATCAGGGAATAATATTGCTCCTACTATGCTTCAATTTGCAAAGACAAGAAAATTATCGATTGAACGTGCAGACCCAAGACACTGTACCCTCTTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCAATGGTATTAGAGCAAGTGTTATCAGATCGAGATAGTGAGGATGAAGTAGATGATGATGTTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTCGTTGACGTGACGAAGGATGAGAAACAAATGATGCATATGTGGAACTCCTTTGTGAGGAAACAAAGGGTGCTAGCAGATGGCCATATTCCGTGGTCTTGTGAGGCGTTTTCAAAATTACATGGACCAACCCTTGTTAGAGCTCCAGCTCTGTTATGGTGCTGGAGATTATTTATGGTTAAATTGTGGAACCATGGTCTTCTTGATGCACACTCCATGAATAATTGTAACATTATTCTTCAAAGAATACATACCGAAGCTTCAGATCCTAAAAGCTGA 1905 40.05 MKDVWYNGSIGNYLLRWYASYSRSADQMCRVESRVHLSAEEEVAAEESLSLYCKPVELYNILQRRAINNPLFLQRCLSYKIETKHKKRIQMAISITKTLSGGGQAHNLFPLQVILGRLISDIAVAEFSGVYRFSRACLITGINRVEGNSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSPNTLSGVDSIDGPLNMTSVPVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSCLDGEKCVAFQIPHNSDTMHIAQQVQVTISAEEFGARDKSPYDSYTYSDIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRHHLLSLHDLFNFEFWVTEEYQAVNVSTKTDIWRSEIIADGIDPKQQTFFFCSRPLRRKKVKNLVQNAKHAHPFVVDSEFLDKVDDAHSSKGEKAQISGFLSSSLHSSNDPDCVQSISGNNIAPTMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMVLEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWSCEAFSKLHGPTLVRAPALLWCWRLFMVKLWNHGLLDAHSMNNCNIILQRIHTEASDPKS 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41868031 41883189 + evm.model.ptg000004l.347 HCH11g1034 554501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g1034 634 CDD ZnB-Zn_EMF2-like 304 383 - -
HCH11g1034 634 CDD VEFS-box_EMF2-like 498 625 - -
HCH11g1034 634 PANTHER POLYCOMB GROUP PROTEIN 32 633 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
HCH11g1034 634 Pfam VEFS-Box of polycomb protein 485 620 IPR019135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1034 HCH-Chr11:41868031 HCH6g1049 HCH-Chr6:45188375 6.90E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g1034 - - - 0.0