Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g1166 ATGGATTCACTTTCCACTTTCTCTTCTCTTTCAATCACTGCAAGTTTGGTTGTAATTTTCACTCTTGTAGTGATAAAGTACCGTGGCAGCAGATTTTCGTGGAAGAGAAAAAGATATCCACCAATTGCAGGCACTTGCTTAAACCAACTGATCAACTTTCATAGGCTGCTTGAGTTCATGACTGATCTTGCAAACAAACACAAAACTTACAGATTACTGAGCCTCTTCAGGAGTGAAGTTTACACTTCAGATCCTGCAAATGTTGAATATATCCTCAAAACAAATTTTGCAAACTATGGAAAGGGAAGATATCATCATAACATTTTGAAGGATCTGATGGGGGATGGGATTTTCACGGTCGATGGCGAAAAGTGGCGGTATCAAAGGAAGATGGCAAGCCATGAATTTTCAACCAAGATGCTGAGAGACTTCAGTGCAGGAGTTTTCCATGATAGTGCAGTGAAACTTGCTGGCATAGTGTCTCAAGCTGCAAATTCAAATCAAGCCATAGAGATTCAAGATTTATTCATGAAATCAACATTAGACTCAGTCTTCAAGATAATTTTGGGAATAGAATTAGACAGTATGTGTGGAACAAATGAAGAAGGCTCAAAGTTCTACCGCGCTTTCGATGAAGCAAGTTCGGTTATCATGTATCGCTATGTGGACATCTTCTGGCAGCTCAAGAGGTTTCTTAACATTGGATCAGAAGCAGTTCTTAAAAACAGTATAAAAGTGGTTGATGAATTTGTGTATAAAGTAATTGAAAGCAAGAGAAAACAACCCCACGAGTCAAAAGAAGATTGCGCTACAAAGAAGACAGACATTCTATCGCGGTTTCTGGAAATGGGAGAGACAGATTCTAAGAAGCTAAAAGACATAACCTTATGTTTCATAATTGCTGGAAAAGACACAACAGCAATCACTCTTTCCTGGTTCCTTTACATGCTTTGCAAGCACCCACAAATCCAGGAAAAGATTGCTCAGGAGGTGATAGAAGTAGCAGAATTCTACTCAAATCAAAGTGTTGATGATCTATCAGCCAAGGCAACTGAGGAAATGCTTGAAAAAATGCATTATGTTCATGCAGCATTGACTGAGACACTCAGACTCTACCCAGCAGTTCCAGTGGAGGGCAAATTTTGTTTTGCTGATGATACATGGCCAGATGGATTTAGTGTGAGGAACGGTGATCTGGTATCGTTCCAACCATACGTCATGGGAAGGATGAAATTCATATGGGGAGACGATGCAGGGGAATTCCGACCTGAGAGATGGCTTGATGAGAATGGTATTTTCATGCCAGAGAGCCCCTTCAAGTTTACAGCTTTTCAGGCTGGTCCAAGAATTTGCTTAGGAAAGGAATTTGCTTACTGTCAAATGAAGATATTTACAGCTATCTTAGTTGGAAACTATGTTTTCAAACTAAATGATGGAAAGAAAGGAGTTTCACATATAACAACACTCACTCTTCAGATTGATGGTGGTCTTTATCTCCAGGCTGTCCCAAGAAAAGTTCAATAA 1524 39.7 MDSLSTFSSLSITASLVVIFTLVVIKYRGSRFSWKRKRYPPIAGTCLNQLINFHRLLEFMTDLANKHKTYRLLSLFRSEVYTSDPANVEYILKTNFANYGKGRYHHNILKDLMGDGIFTVDGEKWRYQRKMASHEFSTKMLRDFSAGVFHDSAVKLAGIVSQAANSNQAIEIQDLFMKSTLDSVFKIILGIELDSMCGTNEEGSKFYRAFDEASSVIMYRYVDIFWQLKRFLNIGSEAVLKNSIKVVDEFVYKVIESKRKQPHESKEDCATKKTDILSRFLEMGETDSKKLKDITLCFIIAGKDTTAITLSWFLYMLCKHPQIQEKIAQEVIEVAEFYSNQSVDDLSAKATEEMLEKMHYVHAALTETLRLYPAVPVEGKFCFADDTWPDGFSVRNGDLVSFQPYVMGRMKFIWGDDAGEFRPERWLDENGIFMPESPFKFTAFQAGPRICLGKEFAYCQMKIFTAILVGNYVFKLNDGKKGVSHITTLTLQIDGGLYLQAVPRKVQ 507
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 43845654 43848297 + evm.model.ptg000004l.215 HCH11g1166 554633
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH11g1166 507 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 PANTHER CYTOCHROME P450 21 497 - -
HCH11g1166 507 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 SUPERFAMILY Cytochrome P450 40 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 Pfam Cytochrome P450 49 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1166 507 CDD CYP86A 68 497 - -
HCH11g1166 507 Gene3D Cytochrome P450 38 507 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1166 HCH-Chr11:43845654 HCH7g1563 HCH-Chr7:48070636 9.90E-172 dispersed
HCH11g1166 HCH-Chr11:43845654 HCH7g1560 HCH-Chr7:48046493 5.90E-132 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g1166 - - - 0.0