Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH11g1166 | ATGGATTCACTTTCCACTTTCTCTTCTCTTTCAATCACTGCAAGTTTGGTTGTAATTTTCACTCTTGTAGTGATAAAGTACCGTGGCAGCAGATTTTCGTGGAAGAGAAAAAGATATCCACCAATTGCAGGCACTTGCTTAAACCAACTGATCAACTTTCATAGGCTGCTTGAGTTCATGACTGATCTTGCAAACAAACACAAAACTTACAGATTACTGAGCCTCTTCAGGAGTGAAGTTTACACTTCAGATCCTGCAAATGTTGAATATATCCTCAAAACAAATTTTGCAAACTATGGAAAGGGAAGATATCATCATAACATTTTGAAGGATCTGATGGGGGATGGGATTTTCACGGTCGATGGCGAAAAGTGGCGGTATCAAAGGAAGATGGCAAGCCATGAATTTTCAACCAAGATGCTGAGAGACTTCAGTGCAGGAGTTTTCCATGATAGTGCAGTGAAACTTGCTGGCATAGTGTCTCAAGCTGCAAATTCAAATCAAGCCATAGAGATTCAAGATTTATTCATGAAATCAACATTAGACTCAGTCTTCAAGATAATTTTGGGAATAGAATTAGACAGTATGTGTGGAACAAATGAAGAAGGCTCAAAGTTCTACCGCGCTTTCGATGAAGCAAGTTCGGTTATCATGTATCGCTATGTGGACATCTTCTGGCAGCTCAAGAGGTTTCTTAACATTGGATCAGAAGCAGTTCTTAAAAACAGTATAAAAGTGGTTGATGAATTTGTGTATAAAGTAATTGAAAGCAAGAGAAAACAACCCCACGAGTCAAAAGAAGATTGCGCTACAAAGAAGACAGACATTCTATCGCGGTTTCTGGAAATGGGAGAGACAGATTCTAAGAAGCTAAAAGACATAACCTTATGTTTCATAATTGCTGGAAAAGACACAACAGCAATCACTCTTTCCTGGTTCCTTTACATGCTTTGCAAGCACCCACAAATCCAGGAAAAGATTGCTCAGGAGGTGATAGAAGTAGCAGAATTCTACTCAAATCAAAGTGTTGATGATCTATCAGCCAAGGCAACTGAGGAAATGCTTGAAAAAATGCATTATGTTCATGCAGCATTGACTGAGACACTCAGACTCTACCCAGCAGTTCCAGTGGAGGGCAAATTTTGTTTTGCTGATGATACATGGCCAGATGGATTTAGTGTGAGGAACGGTGATCTGGTATCGTTCCAACCATACGTCATGGGAAGGATGAAATTCATATGGGGAGACGATGCAGGGGAATTCCGACCTGAGAGATGGCTTGATGAGAATGGTATTTTCATGCCAGAGAGCCCCTTCAAGTTTACAGCTTTTCAGGCTGGTCCAAGAATTTGCTTAGGAAAGGAATTTGCTTACTGTCAAATGAAGATATTTACAGCTATCTTAGTTGGAAACTATGTTTTCAAACTAAATGATGGAAAGAAAGGAGTTTCACATATAACAACACTCACTCTTCAGATTGATGGTGGTCTTTATCTCCAGGCTGTCCCAAGAAAAGTTCAATAA | 1524 | 39.7 | MDSLSTFSSLSITASLVVIFTLVVIKYRGSRFSWKRKRYPPIAGTCLNQLINFHRLLEFMTDLANKHKTYRLLSLFRSEVYTSDPANVEYILKTNFANYGKGRYHHNILKDLMGDGIFTVDGEKWRYQRKMASHEFSTKMLRDFSAGVFHDSAVKLAGIVSQAANSNQAIEIQDLFMKSTLDSVFKIILGIELDSMCGTNEEGSKFYRAFDEASSVIMYRYVDIFWQLKRFLNIGSEAVLKNSIKVVDEFVYKVIESKRKQPHESKEDCATKKTDILSRFLEMGETDSKKLKDITLCFIIAGKDTTAITLSWFLYMLCKHPQIQEKIAQEVIEVAEFYSNQSVDDLSAKATEEMLEKMHYVHAALTETLRLYPAVPVEGKFCFADDTWPDGFSVRNGDLVSFQPYVMGRMKFIWGDDAGEFRPERWLDENGIFMPESPFKFTAFQAGPRICLGKEFAYCQMKIFTAILVGNYVFKLNDGKKGVSHITTLTLQIDGGLYLQAVPRKVQ | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 43845654 | 43848297 | + | evm.model.ptg000004l.215 | HCH11g1166 | 554633 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH11g1166 | 507 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | PANTHER | CYTOCHROME P450 | 21 | 497 | - | - | |
| HCH11g1166 | 507 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | SUPERFAMILY | Cytochrome P450 | 40 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | Pfam | Cytochrome P450 | 49 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1166 | 507 | CDD | CYP86A | 68 | 497 | - | - | |
| HCH11g1166 | 507 | Gene3D | Cytochrome P450 | 38 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g1166 | HCH-Chr11:43845654 | HCH7g1563 | HCH-Chr7:48070636 | 9.90E-172 | dispersed | |
| HCH11g1166 | HCH-Chr11:43845654 | HCH7g1560 | HCH-Chr7:48046493 | 5.90E-132 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH11g1166 | - | - | - | 0.0 |