Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g1168 ATGGCTGAAAATCCAGTAAAACAGCTAGTTCTAATGCTGTTTTTCAACTTCTTCCTTCTCTCAAACTCTCAAACACCACCATCCATGAAAACTTACCTCATTCAAATGGACAAATCAGCAAAGCCAAACTCATTTTCCAATCACCTTGAATGGTACTCCACATTGGTAAACAAAATAGTCATGACCCAAGAAGCCATTCATGAAGGAAATGATGAAAGAAGAATCCTTTACAGTTACCAAAATGTCTTCCATGGAGTTGCAGCTCTACTAACTGAACAAGAAGCTGAAAAACTAGAAGAACTAGATGGGGTTTTAGCCATTTTCCCAGAGACTAAATATGAACTTCATACAACAAGAAGTCCAAAGTTTCTTGGCTTGGAACCAGCTTATACAAATAGTGTCTGGTCTCAAAAACTGTCAGACCATGATGTCATAGTTGGTGTTTTAGATACTGGAATTTGGCCTGAAAGTGAGAGTTTTAATGATGTGGGAATGTCACCAATTCCTTCTTATTGGAAAGGAGTTTGTGAAATAGGCCGTGGATTTACAAAACAGCATTGTAATAGGAAGATTGTTGGTGCTAGAATGTTCTACCGTGGCTATGAAGCTTCTGTGGGGAAGTTTAATGAACAATTGGAGTATAAATCTCCTAGAGATCAAGATGGACATGGAACTCACACTGCAGCCACGGTTGCTGGCTCTCCTGTCTCTGGAGCGAGCCTGCTTGGTTATGCTTATGGAACAGCACGAGGCATCGCTCCCGCCGCCCGGGTTGCGGCCTATAAAGTGTGTTGGGCTGGTGGATGTTTTAGTTCCGATATTTTATCGGCGGTGGATCGAGCTGTTGCTGATGGAGTTAATGTGTTGTCTATCTCTTTGGGAGGTGGAGTTTCTTCTTACTATAGAGATACTCTTTCAGTGGCTGCATTTGGAGCTATGGAAAGGGGAGTGTTTGTTTCTTGCTCAGCTGGGAATGGAGGGCCTGATCCTGTTAGTCTTACCAATGTGTCACCATGGATCACCACGGTTGGTGCCAGTACAATGGATAGAGATTTCCCTGCTGTTGTTAAGCTTGGAAACGGCGGGACCGTGACCGGTGTCTCGCTTTATAAAGGAAGGAGGATGATTTCAGAGAACAAGCAATTCCCTGTTGTCTATATGGGTAGTAACTCTAGCAACCCTGATCCTAGTTCTTTGTGTTTAGAAGGAACATTGGATCCACATTTTGTATCAGGAAAAATTGTCATATGCGATCGCGGGATTAGCCCTCGAGTTGCGAAGGGTCAAGTGGTGAAAAATGCAGGGGGGGTTGGGATGATTTTGTCAAACACAGCTGCAAATGGTGAAGAACTTGTTGCAGATTGTCATCTTTTACCTGCAGTGGCAGTGGGAGAGAAAGAAGGCAAAGACATTAAACATTATGCCTTAACCAATCCAAGAGCTTCTGCAACTCTAGCATTTTTAGGGACAAGATTGGGAGTTAAACCATCTCCAGTTGTGGCAGCATTTTCTTCCAGAGGACCAAATTTTCTCTCACTAGAGATTCTCAAGCCAGATTTGGTGGCACCAGGAGTTAACATTCTTGCTGCTTGGACTGGAAAAATAGGCCCATCAAGCTTGTCAACAGATAGCAGAAGAGTTAAGTTCAATATTCTTTCTGGAACTTCAATGTCTTGCCCACATGTTAGTGGAGTTGCTGCTTTGATCAAATCCAAGCATCCAGATTGGAGTCCAGCAGCTATCAAATCAGCTCTAATGACCACAGCTTATGTCCATGACAATACTTATAATCCTCTCAAGGATTCGTCGGCGACGGCTTCGCCATCGAGTCCCTATGATCACGGGGCTGGACATATAAACCCGAGAAAAGCCTTGGATCCCGGTTTGGTTTATGATATCCAGCCTCAAGATTACTTTGAATTCCTTTGCACACAGGCTCTAACCCCTACCCAGCTCAAAGTTTTCTCCAAATACTCAAACAGGTCTTGCCATCACCTTCTTGCCAATCCAGGAGACCTGAATTATCCAGCAATCTCAGTTGTTTTCCCTGAGAAAACTTCCATCAATTCCTTGACCATTCATAGAACTGTCACCAATGTTGGCCTTGGAGCCTCTAGTTATCATGTGGTGGTGACTCCATTTAAAGGCGCCTTCGTCAAAGTCGAACCCGAAAGTCTGAATTTCACTGAGAGATATCAGAAGCTTTCCTATAGAGTTACTTTCCTGACCAAGACTAGACAAACTATGCCTGAGTTTGGAGGGCTGGTGTGGAAGGATGGAACTCATAGAGTCAGAAGCCCCATTGTCATCACTTGGTTGTCATCTCTTTGA 2331 43.63 MAENPVKQLVLMLFFNFFLLSNSQTPPSMKTYLIQMDKSAKPNSFSNHLEWYSTLVNKIVMTQEAIHEGNDERRILYSYQNVFHGVAALLTEQEAEKLEELDGVLAIFPETKYELHTTRSPKFLGLEPAYTNSVWSQKLSDHDVIVGVLDTGIWPESESFNDVGMSPIPSYWKGVCEIGRGFTKQHCNRKIVGARMFYRGYEASVGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVSGASLLGYAYGTARGIAPAARVAAYKVCWAGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDTLSVAAFGAMERGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAVVKLGNGGTVTGVSLYKGRRMISENKQFPVVYMGSNSSNPDPSSLCLEGTLDPHFVSGKIVICDRGISPRVAKGQVVKNAGGVGMILSNTAANGEELVADCHLLPAVAVGEKEGKDIKHYALTNPRASATLAFLGTRLGVKPSPVVAAFSSRGPNFLSLEILKPDLVAPGVNILAAWTGKIGPSSLSTDSRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPAAIKSALMTTAYVHDNTYNPLKDSSATASPSSPYDHGAGHINPRKALDPGLVYDIQPQDYFEFLCTQALTPTQLKVFSKYSNRSCHHLLANPGDLNYPAISVVFPEKTSINSLTIHRTVTNVGLGASSYHVVVTPFKGAFVKVEPESLNFTERYQKLSYRVTFLTKTRQTMPEFGGLVWKDGTHRVRSPIVITWLSSL 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 43856094 43858424 + evm.model.ptg000004l.213 HCH11g1168 554635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g1168 776 Gene3D - 349 493 - -
HCH11g1168 776 ProSiteProfiles Serine proteases, subtilase domain profile. 112 625 - -
HCH11g1168 776 Pfam PA domain 383 471 IPR003137 -
HCH11g1168 776 FunFam Subtilisin-like protease SBT1.9 21 116 - -
HCH11g1168 776 CDD Peptidases_S8_3 113 590 IPR034197 -
HCH11g1168 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
HCH11g1168 776 Pfam Fibronectin type-III domain 672 770 IPR041469 -
HCH11g1168 776 Pfam Peptidase inhibitor I9 31 116 IPR010259 -
HCH11g1168 776 FunFam Subtilisin-like protease SBT1.5 143 365 - -
HCH11g1168 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 116 IPR037045 -
HCH11g1168 776 FunFam subtilisin-like protease SBT1.5 349 492 - -
HCH11g1168 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 769 IPR045051 -
HCH11g1168 776 Pfam Subtilase family 142 597 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH11g1168 776 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
HCH11g1168 776 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
HCH11g1168 776 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
HCH11g1168 776 SUPERFAMILY Subtilisin-like 115 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH11g1168 776 Gene3D Peptidase S8/S53 domain 143 638 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH11g1168 776 CDD PA_subtilisin_like 355 485 - -
HCH11g1168 776 Gene3D - 642 773 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1168 HCH-Chr11:43856094 HCH14g0343 HCH-Chr14:32310785 1.60E-229 dispersed
HCH14g1153 HCH-Chr14:38356229 HCH11g1168 HCH-Chr11:43856094 9.00E-93 transposed
HCH5g0130 HCH-Chr5:780864 HCH11g1168 HCH-Chr11:43856094 3.10E-185 transposed
HCH8g0429 HCH-Chr8:38821542 HCH11g1168 HCH-Chr11:43856094 1.10E-198 transposed
HCH10g0224 HCH-Chr10:1879561 HCH11g1168 HCH-Chr11:43856094 1.40E-98 transposed
HCH11g1168 HCH-Chr11:43856094 HCH5g0452 HCH-Chr5:3031095 5.40E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g1168 - - - 0.0