Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g1181 ATGGCAAAAAATGCAACAATTTTGTTCTTAATGGTAATGGTCTGTGTGTCGGAAGGAGTTTTGGATAACAATTATTACAGAAAAACATGTCCAAATGCTGAGAAAATCATCCTCCAAACAGTTTATAATGCTTCTACTCATGACCCTAAAGTCCCAGCTCGTCTTCTTAGACTATTCTTCCATGATTGTTTCATAAGGGGATGTGATGGATCAGTGTTAATAGACTCAACACCAGGAAACCAAGCAGAGAAAGATGCACCTCCAAACATCTCACTCAGGTCATTCTATGTGATCGATGAGGCGAAAGCCAAGCTTGAAACTGTCTGTCCACATACTGTTTCCTGTGCTGATATTGTTGCTATCGCTGCTAGAGACGTTGTAACTCTCTCAGGAGGCCCATATTGGAATGTGCTGAAAGGAAGGAAAGATGGGAAAATTTCCAAAGCTTCAGAAACAATCAACCTGCCATCTCCAACTTTCAATGGATCACAACTCATCCAAAGCTTTGGAAAAAGAGGGTTAGGAGTTAAAGACATGGTTGCTCTATCTGGGGCCCACACTCTTGGATTCTCACATTGTTCTTCCTTTGCATCAAGAATTCACAATTTCAGCTCTCTGCATGAAATTGATCCAAGTTTGGAGAATGGTTTTGCTCAAATTCTGAGGAAGAAATGTCCAAAACTGAATTTGGATAAAAATGGAGGAGAGTTTTTGGACCCAACTTCTTCAAGTTTTGATAATGTGTATTACAAGAGAATTTTGGAAGGAAAAGGTGTGTTTGGTTCAGATCAAGCTTTGTTTGGTGATGAAAGAAGTAGATGGATTGTTGGGTTGTTTGCGAAAGATCAGGATTTGTTCTTTAAGGAGTTTGCAGCTTCAATGGTCAAACTCGGTAACGTCGGTGTTAGTGAAAATGGTGATATCAGACTTAATTGCAGGCTGGTGAACTGA 951 39.85 MAKNATILFLMVMVCVSEGVLDNNYYRKTCPNAEKIILQTVYNASTHDPKVPARLLRLFFHDCFIRGCDGSVLIDSTPGNQAEKDAPPNISLRSFYVIDEAKAKLETVCPHTVSCADIVAIAARDVVTLSGGPYWNVLKGRKDGKISKASETINLPSPTFNGSQLIQSFGKRGLGVKDMVALSGAHTLGFSHCSSFASRIHNFSSLHEIDPSLENGFAQILRKKCPKLNLDKNGGEFLDPTSSSFDNVYYKRILEGKGVFGSDQALFGDERSRWIVGLFAKDQDLFFKEFAASMVKLGNVGVSENGDIRLNCRLVN 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 44145788 44147378 - evm.model.ptg000004l.200 HCH11g1181 554648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g1181 316 ProSiteProfiles Plant heme peroxidase family profile. 20 316 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 FunFam Peroxidase 156 297 - -
HCH11g1181 316 CDD secretory_peroxidase 21 315 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
HCH11g1181 316 FunFam Peroxidase 24 162 - -
HCH11g1181 316 Gene3D Peroxidase, domain 2 156 297 - -
HCH11g1181 316 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PANTHER - 9 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
HCH11g1181 316 Pfam Peroxidase 39 282 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 Gene3D - 24 316 - -
HCH11g1181 316 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH11g1181 316 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1181 HCH-Chr11:44145788 HCH14g0676 HCH-Chr14:35297952 5.40E-91 dispersed
HCH11g1181 HCH-Chr11:44145788 HCH4g0812 HCH-Chr4:5229906 4.70E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g1181 K00430 - csv:101210306 538.88