Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH11g1227 | ATGGGGTTCTGCTACCAGCTGCTCTTTCATGTCTTTCTATGGGGAATTAGGATTTTTCTTGTCTTTTTGTTTGGGAGAGTGGTTTTTTCTTGGTGGGTTTTGCCATTTTTGGCTCACAAGAAGCTTAAGAGAAATGGATTTCATGGTCCATCTCCAAGTTTCCCTCTTGGGAATATCAATGAGATGAAAAGGAAGAGATCATCAACTTCCATAAGTGGAAGTAGAAATGATTCTTCCTTTGGTTCCTCAGATATCAGCCATGATTTTCATTCACTTGTTTTCCCATATTTTGCTGATTGGCAGAGATCATATGGGAAGAAGTATATATACTGGTTAGGGACGGAGCCATTTTTATACATAGCAGATCCAGAGTTTCTGAAGAATGTGTCAGAAATGGTGATGGGGAAGAGCTGGGGGAAGCCGACGGTGTTCAAAAACGACAGAGAACCGATGTTCGGCGACGGCCTCGTCATGACTGAAGGAGATGACTGGATCCGCCATCGCCATTTCCTCACTCCTGCTTTCAACCCCACCAACTTGAAGTCTATGACAAGGTTCATGGTAGACTCCACGACAGAAATGCTAAACAAATGGACCAACCTCGTCAACTCCGGCCATCAAGAAATCGACGTCGAGAGAGAAATAACGGCCACCGCCGGAGCCATCATCGCCAAAGCAAGCTTCGGCATACACGATCAAACCGGCAGAGACACTTTCAACAAGCTTAGAGCTTTACAAACGACTCTTTTCTCCAACAGCAGTTACGTAGGTGTTCCTTTCAGCAGCATCTTCCTTTATCCATCAAGAACCCTAGAAGCGAAAAAACTCGGTGCCGAAATCGATAGAATCTTTTTCTCGATAATATCGGAGAGAAGACAGTCGGAGAAATGTAGTTCCGATTTGCTTAGTTTGATGGTTGAGAATCAAAGGAGCAACGACGGTGGTGAGGGGAAGAAGAAGAAGAAGAGATTGACGACGAGGGAATTAGTTGATGAGTGTAAGACTTTCTTCTTCGGCGGCCATGAGACGACGGCGCTGGCGATTAGTTGGACTTTGATGTTGTTGGCGATGAATCAAGAGTGGCAAATGATATTACGTGAAGAGATTAAAGAAGTTGTTGGAGATAAAGAGATTGATTTCTCAATGCTTTCTTCTCTCAAAAAGATGGGATGGGTGTTCAATGAGGTACTTAGGCTATACCCACCAGCACCAAATGTACAAAGACAAGCCAAAGAAGACATCAAAGTGGGGGACATGACCATTCCCAAAGGAACAAACATATGGATAGATGTTGTTGCCATGCACCATGATAAAGCCCTATGGGGTGAAGAAGTGAACCAATTTAAGCCAGAGAGGTTCCAAAATGACAGCATCTATGGTGGCTGCAGTCACAAGATGGGATATTTGCCATTTGGGTTTGGAGGGAGAATGTGCATTGGAAGAAACCTATCTTCTATGGAGTTCAAGATTGTCCTAACCCTAATTCTCTCTAGGTTTTCTTTCTCTCCCTCTCCTTCTTACTCTCATTCTCCTGCCATTCTGCTCTCTTTGAGACCTTCCCATGGCCTTCCTCTCATTGTAAAACCCCTTCATCAGGCTTAG | 1602 | 44.13 | MGFCYQLLFHVFLWGIRIFLVFLFGRVVFSWWVLPFLAHKKLKRNGFHGPSPSFPLGNINEMKRKRSSTSISGSRNDSSFGSSDISHDFHSLVFPYFADWQRSYGKKYIYWLGTEPFLYIADPEFLKNVSEMVMGKSWGKPTVFKNDREPMFGDGLVMTEGDDWIRHRHFLTPAFNPTNLKSMTRFMVDSTTEMLNKWTNLVNSGHQEIDVEREITATAGAIIAKASFGIHDQTGRDTFNKLRALQTTLFSNSSYVGVPFSSIFLYPSRTLEAKKLGAEIDRIFFSIISERRQSEKCSSDLLSLMVENQRSNDGGEGKKKKKRLTTRELVDECKTFFFGGHETTALAISWTLMLLAMNQEWQMILREEIKEVVGDKEIDFSMLSSLKKMGWVFNEVLRLYPPAPNVQRQAKEDIKVGDMTIPKGTNIWIDVVAMHHDKALWGEEVNQFKPERFQNDSIYGGCSHKMGYLPFGFGGRMCIGRNLSSMEFKIVLTLILSRFSFSPSPSYSHSPAILLSLRPSHGLPLIVKPLHQA | 533 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 44499112 | 44503501 | + | evm.model.ptg000004l.154 | HCH11g1227 | 554694 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH11g1227 | 533 | Pfam | Cytochrome P450 | 95 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | E-class P450 group I signature | 101 | 120 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | E-class P450 group I signature | 328 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | E-class P450 group I signature | 468 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | E-class P450 group I signature | 478 | 501 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 471 | 480 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH11g1227 | 533 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 28 | 524 | IPR050665 | GO:0004497(PANTHER) | |
| HCH11g1227 | 533 | Gene3D | Cytochrome P450 | 33 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | P450 superfamily signature | 339 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | P450 superfamily signature | 469 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | PRINTS | P450 superfamily signature | 478 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH11g1227 | 533 | SUPERFAMILY | Cytochrome P450 | 89 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g1227 | HCH-Chr11:44499112 | HCH9g0365 | HCH-Chr9:2261358 | 6.90E-91 | dispersed | |
| HCH11g1227 | HCH-Chr11:44499112 | HCH5g0810 | HCH-Chr5:6340829 | 2.20E-198 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH11g1227 | - | - | - | 0.0 |