Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g1227 ATGGGGTTCTGCTACCAGCTGCTCTTTCATGTCTTTCTATGGGGAATTAGGATTTTTCTTGTCTTTTTGTTTGGGAGAGTGGTTTTTTCTTGGTGGGTTTTGCCATTTTTGGCTCACAAGAAGCTTAAGAGAAATGGATTTCATGGTCCATCTCCAAGTTTCCCTCTTGGGAATATCAATGAGATGAAAAGGAAGAGATCATCAACTTCCATAAGTGGAAGTAGAAATGATTCTTCCTTTGGTTCCTCAGATATCAGCCATGATTTTCATTCACTTGTTTTCCCATATTTTGCTGATTGGCAGAGATCATATGGGAAGAAGTATATATACTGGTTAGGGACGGAGCCATTTTTATACATAGCAGATCCAGAGTTTCTGAAGAATGTGTCAGAAATGGTGATGGGGAAGAGCTGGGGGAAGCCGACGGTGTTCAAAAACGACAGAGAACCGATGTTCGGCGACGGCCTCGTCATGACTGAAGGAGATGACTGGATCCGCCATCGCCATTTCCTCACTCCTGCTTTCAACCCCACCAACTTGAAGTCTATGACAAGGTTCATGGTAGACTCCACGACAGAAATGCTAAACAAATGGACCAACCTCGTCAACTCCGGCCATCAAGAAATCGACGTCGAGAGAGAAATAACGGCCACCGCCGGAGCCATCATCGCCAAAGCAAGCTTCGGCATACACGATCAAACCGGCAGAGACACTTTCAACAAGCTTAGAGCTTTACAAACGACTCTTTTCTCCAACAGCAGTTACGTAGGTGTTCCTTTCAGCAGCATCTTCCTTTATCCATCAAGAACCCTAGAAGCGAAAAAACTCGGTGCCGAAATCGATAGAATCTTTTTCTCGATAATATCGGAGAGAAGACAGTCGGAGAAATGTAGTTCCGATTTGCTTAGTTTGATGGTTGAGAATCAAAGGAGCAACGACGGTGGTGAGGGGAAGAAGAAGAAGAAGAGATTGACGACGAGGGAATTAGTTGATGAGTGTAAGACTTTCTTCTTCGGCGGCCATGAGACGACGGCGCTGGCGATTAGTTGGACTTTGATGTTGTTGGCGATGAATCAAGAGTGGCAAATGATATTACGTGAAGAGATTAAAGAAGTTGTTGGAGATAAAGAGATTGATTTCTCAATGCTTTCTTCTCTCAAAAAGATGGGATGGGTGTTCAATGAGGTACTTAGGCTATACCCACCAGCACCAAATGTACAAAGACAAGCCAAAGAAGACATCAAAGTGGGGGACATGACCATTCCCAAAGGAACAAACATATGGATAGATGTTGTTGCCATGCACCATGATAAAGCCCTATGGGGTGAAGAAGTGAACCAATTTAAGCCAGAGAGGTTCCAAAATGACAGCATCTATGGTGGCTGCAGTCACAAGATGGGATATTTGCCATTTGGGTTTGGAGGGAGAATGTGCATTGGAAGAAACCTATCTTCTATGGAGTTCAAGATTGTCCTAACCCTAATTCTCTCTAGGTTTTCTTTCTCTCCCTCTCCTTCTTACTCTCATTCTCCTGCCATTCTGCTCTCTTTGAGACCTTCCCATGGCCTTCCTCTCATTGTAAAACCCCTTCATCAGGCTTAG 1602 44.13 MGFCYQLLFHVFLWGIRIFLVFLFGRVVFSWWVLPFLAHKKLKRNGFHGPSPSFPLGNINEMKRKRSSTSISGSRNDSSFGSSDISHDFHSLVFPYFADWQRSYGKKYIYWLGTEPFLYIADPEFLKNVSEMVMGKSWGKPTVFKNDREPMFGDGLVMTEGDDWIRHRHFLTPAFNPTNLKSMTRFMVDSTTEMLNKWTNLVNSGHQEIDVEREITATAGAIIAKASFGIHDQTGRDTFNKLRALQTTLFSNSSYVGVPFSSIFLYPSRTLEAKKLGAEIDRIFFSIISERRQSEKCSSDLLSLMVENQRSNDGGEGKKKKKRLTTRELVDECKTFFFGGHETTALAISWTLMLLAMNQEWQMILREEIKEVVGDKEIDFSMLSSLKKMGWVFNEVLRLYPPAPNVQRQAKEDIKVGDMTIPKGTNIWIDVVAMHHDKALWGEEVNQFKPERFQNDSIYGGCSHKMGYLPFGFGGRMCIGRNLSSMEFKIVLTLILSRFSFSPSPSYSHSPAILLSLRPSHGLPLIVKPLHQA 533
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 44499112 44503501 + evm.model.ptg000004l.154 HCH11g1227 554694
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH11g1227 533 Pfam Cytochrome P450 95 506 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH11g1227 533 PANTHER CYTOCHROME P450 FAMILY MEMBER 28 524 IPR050665 GO:0004497(PANTHER)
HCH11g1227 533 Gene3D Cytochrome P450 33 532 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH11g1227 533 SUPERFAMILY Cytochrome P450 89 529 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1227 HCH-Chr11:44499112 HCH9g0365 HCH-Chr9:2261358 6.90E-91 dispersed
HCH11g1227 HCH-Chr11:44499112 HCH5g0810 HCH-Chr5:6340829 2.20E-198 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g1227 - - - 0.0