Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g1228 ATGAAGCTGAACGCCGTCGTCTATTTCGTTTTTATAGCTCTTCTGGCAACTTCGGCGGCGCCGTGGATTCCGATCTCGGAGGCGCGATTGCTCGTGAATATGACGCTCGTTCGTAACGCCTCTTCTCTCGGAGCCTTTTGTTTGGACGGAAGTTCGCCGGCGTATCATCTCGATAGAGGATTCGGCGACGGAGCGGGAAACTGGCTGTTACAATTTGAGGGTGGTGGGTGGTGCAGTGATGTGGATTCCTGTTTAGAAAGGGCGAATACCAGAAGAGGATCAACTCGTTTCATGAACCAGTGGGAGGATTTCTCTGGCATTCTTAGCAATAATGCTTCTCTTAATCCAGATTTCTACAACTGGAACCGAGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGCAGGAGATGCCTTGTTTGACAATGGGACCTCAATTCTTTATTTCAAAGGGCAAAAGATTTGGGAATCCATCATTCTTGACCTTCTACCAAAAGGATTGGGGACAGCAAGAAAGGCTTTACTTTCTGGTTGCTCTGCTGGAGGATTGGCATCTTTTTTACATTGTGACAACTTCACCAACTATTTACCAAGAAATGCCAGTGTTAAATGCTTGAGTGATGCTGGATTTTTCCTTGATTTAAGAGATATCAGTTTAAACCACACCATGAGGACCTTCTACAAAGATCTCGTGACTCTTCAGGGGATGGAGCAAAATCTGGATAAAAACTGCACTGCCTCCTCTTACTATCCAGATTTGTGCATCTTCCCTCAGTATTCATTGAAATATACAACGACGCCATTTTTCGTTCTAAATTCAGCATACGATGTATTCCAATTTCATCACGCATTGGTGCCACCCTCTTCCGATTTACATGGACACTGGAAACGCTGCAAATTTAATCCAGCAGAATGTAGTGAGGAGCAGATTGATGTACTGCAAGGTTTGAGGCTCAGTATGCTTTCTGCTCTAAGACTATTTTACAAGTATTCAACCAGAGGAGGAATGTTCATAAATTCATGCTTTGCTCATTGCCAAAGTGAGTCACAAGAAACATGGTTTGCAGAGGACTCCCCCAAAATAGACAACAAGACCATAGCAGAAGCAGTGGGAGATTGGTACTTTAGCAGGATAATTACAAAGGAGATTGATTGTGCTTATCCATGTGACACTACCTGCCATAATCTTATACCATAA 1197 43.69 MKLNAVVYFVFIALLATSAAPWIPISEARLLVNMTLVRNASSLGAFCLDGSSPAYHLDRGFGDGAGNWLLQFEGGGWCSDVDSCLERANTRRGSTRFMNQWEDFSGILSNNASLNPDFYNWNRVKLRYCDGASFAGDALFDNGTSILYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLASFLHCDNFTNYLPRNASVKCLSDAGFFLDLRDISLNHTMRTFYKDLVTLQGMEQNLDKNCTASSYYPDLCIFPQYSLKYTTTPFFVLNSAYDVFQFHHALVPPSSDLHGHWKRCKFNPAECSEEQIDVLQGLRLSMLSALRLFYKYSTRGGMFINSCFAHCQSESQETWFAEDSPKIDNKTIAEAVGDWYFSRIITKEIDCAYPCDTTCHNLIP 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 44503973 44510916 - evm.model.ptg000004l.153 HCH11g1228 554695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g1228 398 Pfam Pectinacetylesterase 27 377 IPR004963 GO:0016787(InterPro)
HCH11g1228 398 PANTHER NOTUM-RELATED 14 396 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1228 HCH-Chr11:44503973 HCH1g1203 HCH-Chr1:59180259 9.10E-120 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g1228 K19882 - csv:101216160 702.59