Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH11g1286 ATGACCCTCGCCGTGCTCGACGCCCTCGACAACGCTCGCACTCAATGGTACCATGTCACCGCAATAGTCATCGCTGGCATGGGATTCTTCACCGATGCCTACGATCTTTTTTGTATCTCCGCCGTGTCGAAGCTTCTCGGCCGGCTTTATTACTTCGATCCGAGCAGTAGCAAGCCTGGAAAGCTTCCGAACCGGGTGAATAATGCAGTCATAGGAGTTGCCTTGATTGGAACTCTTATGGGGCAGCTTTTCTTTGGTTGGTTGGGAGATAAACTTGGCCGGAAAAAAGTTTATGGTGTCACTCTTATTATGATGGTCATCTGTGCCATTTGTTCAGGGCTGTCTTTTGGGTCGACGGCAAAATCGGTGATCGTAACACTTTGTTTCTTTAGGTTTTGGCTTGGATTTGGCATCGGCGGCGATTATCCACTTTCAGCCACCATCATGTCCGAATATGCAAACAAAAAGACTCGTGGTGCTTTTATTGCTGCAGTGTTCGCTATGCAGGGTGTTGGGCTTGTATTTGCGGGGCTAGTCACAATGATTCTATCAAAAATCTTCCTCTCCCTTCATGATGCTCCCTCATATAAAACCAACCCAGTATTTTCCACACAACCTCAAGGAGACTTCCTATGGCGGATCGTGCTAATGCTCGGTGCATTGCCGGCAATCTTGACATATTACTGGCGAATGAAGATGCCCGAAACCGGTCGCTACACCGCCCTAATCGAAGGCAACGCAAAGCAAGCAGCGGCAGATATGGGAAAGGTTTTGGAAATTAGCATTCAAGCTGATCAAGATAGGCTTCAGCAGTTCAAAGCTGCAAACGAATATGGTATACTCTCTAAAGAATTCTTGCACCGCCATGGACTCCACCTCATCGGAACAACGACGACATGGTTCTTGTTGGACATAGCTTTCTACAGCAATAACTTGACTCAAAAGGATATTTTTCCAGCGATGAATCTAACAAAGAAAGCTGAAGATGTTAATGCATTGGAAGAGGTTTATGAGACATCAAAGGCCATGTTTTTGATAGCTTTGCTTGGAACTTTCCCTGGATATTGGTTCACTGTCTACTTCATAGAGAAGATCGGAAGGTTCAAAATTCAGTTGATGGGATTCTTCATGATGTCGATTTTCATGGCGGCGTTAGGGATCCGATACAATTACATGAAGTCTCATCCGGCTGAATTTGCAATACTTTATGGTTTGACCTTTTTCTTTGCAAACTTTGGTCCAAATAGTACCACCTTCGTCCTCCCGGCAGAGCTCTTCCCAACGAGGATCCGGGCGACATGTCATGCCCTAAGTGCGGCGTCCGGGAAAGCCGGTGCGCTCGTCGGGGCTTTCGGAGTTCAAAACTATACTTTAGATGGAAACCCTACCAAAATTCAGAAGGCTATGATTGTGTTGGCGTTCACCAACATGTTAGGGTTTGTGTTCACATTCTTAGTAACGGAGACGAAAGGCCGGTCGCTGGAGGAAATATCCGGCGAGGATGGTGGTGGCGAAAGCGGAACTCATATGCCTGTAACTCAAATGCCCGTAACATCAATGGGAAAACAAGAAGCCCAAATGGAAGGTGATCATCATGATTTTAGGGGCTAA 1611 46.49 MTLAVLDALDNARTQWYHVTAIVIAGMGFFTDAYDLFCISAVSKLLGRLYYFDPSSSKPGKLPNRVNNAVIGVALIGTLMGQLFFGWLGDKLGRKKVYGVTLIMMVICAICSGLSFGSTAKSVIVTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLVFAGLVTMILSKIFLSLHDAPSYKTNPVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEISIQADQDRLQQFKAANEYGILSKEFLHRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKKAEDVNALEEVYETSKAMFLIALLGTFPGYWFTVYFIEKIGRFKIQLMGFFMMSIFMAALGIRYNYMKSHPAEFAILYGLTFFFANFGPNSTTFVLPAELFPTRIRATCHALSAASGKAGALVGAFGVQNYTLDGNPTKIQKAMIVLAFTNMLGFVFTFLVTETKGRSLEEISGEDGGGESGTHMPVTQMPVTSMGKQEAQMEGDHHDFRG 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 44911437 44913335 - evm.model.ptg000004l.95 HCH11g1286 554753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH11g1286 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 496 - -
HCH11g1286 536 CDD MFS_PhT 22 490 - -
HCH11g1286 536 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
HCH11g1286 536 FunFam Inorganic phosphate transporter 1-6 17 510 - -
HCH11g1286 536 NCBIfam phosphate:H+ symporter 6 500 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
HCH11g1286 536 Gene3D MFS general substrate transporter like domains 17 513 IPR036259 -
HCH11g1286 536 Pfam Sugar (and other) transporter 23 498 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH11g1286 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1286 HCH-Chr11:44911437 HCH7g1330 HCH-Chr7:46208463 7.20E-189 dispersed
HCH11g1286 HCH-Chr11:44911437 HCH6g1501 HCH-Chr6:48563235 5.20E-187 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH11g1286 K08176 - csv:101210631 919.842