Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH11g1355 | ATGGGATCAACAGGTGAAACCCAGATGACTGAAACTGAAATAAGTGATGAAGAAACAAATCTTTTTGCCATGCAATTAGCAAGCGCCTCTGTTCTTCCAATGGTCTTGAAATCAGCCATTGAGCTTGATCTTCTTGAGATCATTGCAAGAGCTGGACATGGTGCTTTCTTGTCGGCTTCCGATATCGCTTCTCAGGTTCCGACAAAGAATCCTCAGGCAGATGTTGTTTTGGACCGTATGTTACGATTGCTGGCAAGTTACTCAATCCTTAAGTATTCACTAAGAACTCTCCCTGATGGCAGAGTTGAGAGGTTGTATGGAGTGGGTCCTGTTTGTAAGTTCTTGACTAAGAATGAAGATGGTGTCTCCATTGCTCCTCTTTGCCTCATGAATCAGGATAAGGTTCTCATGGAAAGCTGGTACCATTTGAAAGATGCAGTATTGGAAGGTGGGATTCCATTCAATAAGGCATATGGAATGACAGCATTTGACTATCATGGAACTGATCCCAGATTCAACAAGGTTTTCAACAGAGGAATGTCTGATCATTCCACCATTACTATGAAGAAGATTCTTGAGACCTACAAAGGCTTTGAAGGCCTCTCTTCACTTGTTGATGTCGGCGGTGGGACTGGAGCTGTCGTTAACATGATCATTTCTAAGTACCCCTCCATTCGAGGCATCAACTTCGATTTGCCTCATGTCATTGAGGATGCTCCTGCTTATCCCGGTGTGGAGCATGTTGGTGGTGACATGTTCGTCAGTGTACCAAAGGCTGATGCTATTTTCATGAAGTGGATCTGCCACGATTGGAGTGATCAGCACTGCTTGAAATTTCTGAAGAACTGCTACGAGGCATTGCCAGAGAACGGGAAGGTGATAGTGGCAGAATGCATTCTTCCAGTAGCTCCAGACAGCAGCCTTGCAGCAAAGGGAGTGATTCACATTGATGTGATAATGTTGGCTCACAACCCAGGAGGGAAAGAAAGGACAGAGAAGGAGTTTGAGGCATTGGCCAAGGGAGCTGGATTCCAAGGTTTTAAAGTCCAATGTTGTGCTTTCAACACATATGTCATAGAATTTCTCAAGACAGTTTGA | 1098 | 44.35 | MGSTGETQMTETEISDEETNLFAMQLASASVLPMVLKSAIELDLLEIIARAGHGAFLSASDIASQVPTKNPQADVVLDRMLRLLASYSILKYSLRTLPDGRVERLYGVGPVCKFLTKNEDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFDYHGTDPRFNKVFNRGMSDHSTITMKKILETYKGFEGLSSLVDVGGGTGAVVNMIISKYPSIRGINFDLPHVIEDAPAYPGVEHVGGDMFVSVPKADAIFMKWICHDWSDQHCLKFLKNCYEALPENGKVIVAECILPVAPDSSLAAKGVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFQGFKVQCCAFNTYVIEFLKTV | 365 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 45377376 | 45380233 | - | evm.model.ptg000004l.26 | HCH11g1355 | 554822 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH11g1355 | 365 | FunFam | Caffeic acid 3-O-methyltransferase | 3 | 115 | - | - | |
HCH11g1355 | 365 | FunFam | Caffeic acid O-methyltransferase | 116 | 363 | - | - | |
HCH11g1355 | 365 | Pfam | Dimerisation domain | 34 | 85 | IPR012967 | GO:0046983(InterPro) | |
HCH11g1355 | 365 | Gene3D | - | 1 | 115 | IPR036388 | - | |
HCH11g1355 | 365 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 24 | 363 | IPR016461 | GO:0008168(InterPro) | |
HCH11g1355 | 365 | Gene3D | Vaccinia Virus protein VP39 | 116 | 363 | IPR029063 | - | |
HCH11g1355 | 365 | Pfam | O-methyltransferase domain | 140 | 345 | IPR001077 | GO:0008171(InterPro) | |
HCH11g1355 | 365 | CDD | AdoMet_MTases | 204 | 295 | - | - | |
HCH11g1355 | 365 | PIRSF | O-mtase | 1 | 363 | IPR016461 | GO:0008168(InterPro) | |
HCH11g1355 | 365 | PANTHER | O-METHYLTRANSFERASE | 18 | 352 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
HCH11g1355 | 365 | SUPERFAMILY | Winged helix DNA-binding domain | 16 | 119 | IPR036390 | - | |
HCH11g1355 | 365 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 120 | 361 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0341 | HCH-Chr11:3184121 | HCH11g1355 | HCH-Chr11:45377376 | 1.20E-57 | dispersed | |
HCH11g1355 | HCH-Chr11:45377376 | HCH6g0866 | HCH-Chr6:43488373 | 2.30E-114 | dispersed | |
HCH11g1355 | HCH-Chr11:45377376 | HCH11g1356 | HCH-Chr11:45382797 | 1.40E-175 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH11g1355 | K13066 | - | mdm:103410332 | 657.521 |