Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g0032 ATGGCCCTCAAAGTTCTTTCGGCTCTGGACACTGCCAAAACTCAATTCTACCATTTCAAGGCCATCATCGTAGCCGGTATGGGTCTCTTCACAGACGCTTATGATCTTTTTAGTATCACTCCCATCATGACACTCATCGGTCGGATTTACTTTCCCTCTCCCTCTCCCTACGAGGTTCCACCCGCTGCCAAATCTACCATGCTCGCCGTCGCCTTTCTCGGTACAGCCATTGGCCAATTGCTCTTTGGAATACTCGGTGATCGAGTAGGAAGACGTCGTGTCTATGGGATTGCCTTGTCACTCATGATTATAAGTTCCATAGGTTGCGGATTCTCCATCTGTACCACCCGGAGTTGTGTTCTCCTAAGTCTGGGGTTTTTCAGGTTTGTTTTGGGGCTCGGAATTGGAGGAGATTACCCGTTGTCGGCAACCATAATGTCTGAATTCGCAAACAAGAAGACGAGAGGAGCGTTCATAGCTGCGGTGTTTTCAATGCAAGGGTTCGGGATTTTGGCAAGTTCGACGGTGACGATGATCGTTTGTTCGATATTCGAGAAAGCCTCGAATACAAGGAATCATGAATTACACACACCAGTGGGGGCGGATATTGCATGGAGGTTGATACTCATGCTTGGTGCTATTCCGGCTGCCATGACTTATTATTGGCGTATGCTGATGCCGGAAACTGCCAGGTATACAGCTCTGGTAGAGCGGAATGTGGAACAAGCGGCGAAGGACATGGAGAAAGTATTGGCCGTGTCATTAAGTGATATCCAAGAAGACACTCCACTCCCACCTTCTCCACCTTCCTTTCCTTTCTTTTCCAAGGAATTTTTATGTCGCCATGGACGCGATCTCTTTTCTTGCTCTGCTTCCTGGTTTCTCGTTGACATCGTCTTCTACAGCAGCAATCTCTTTCAATCTCAAATCTACGACCGTTTCCTTCCATCCAAACAAAACCTTAACGTTTACCAAGCTGCTTTCAATGATGCCAAACTTCAGGCCATCGTCGCCGTCTGTTCCACCATTCCCGGCTATTTCGCTTCCGTTTATTTCATCGACCGTATGGGCAGAGTCAATATCCAAATAATGGGTTTCTTCTTCATGGCCCTTGGCTATCTCGCCATTGGTATTCCCTACGATAAATACTGGGTTCATGGCCGCCTTAACTTTGGTTTCATCATCATCTATTGTCTCACTTTTTTCTTCTCAAATTTTGGACCCAATACCACTACTTTTATACTCCCCGCCGAGCTCTTTCCTGCCAGATTCAGATCAACGTGTCATGGGATATCCGGTGCGGCGGGAAAACTCGGGGCCATTATAGGAGCCGTGGGATACTTATGGGCTTCACATAATCATGAAATGAATGGATATCCAAAAGGAATAGGGATGAAAGCGTCATTGGCGATGTTAGGTGGAGTATGTGTATTGGGAATGATGGTAACATATTTCTTCACAAGAGAAACCATGGGAAGGTCGTTGGAAGAGAATGAAAATGAAGATGAATACAGGGGAATTTGTGTCATCAGGTGTTTGGGAGATGCCAGTGTTTGCTCCCATCCATCTCCTCGTGAAGATGATGATTCTTTTTCAAGTTCAACCTCCATGGAAACTACCTCCAATAATAATATTAATATTAGAACCAGTAGTTAA 1656 45.77 MALKVLSALDTAKTQFYHFKAIIVAGMGLFTDAYDLFSITPIMTLIGRIYFPSPSPYEVPPAAKSTMLAVAFLGTAIGQLLFGILGDRVGRRRVYGIALSLMIISSIGCGFSICTTRSCVLLSLGFFRFVLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASSTVTMIVCSIFEKASNTRNHELHTPVGADIAWRLILMLGAIPAAMTYYWRMLMPETARYTALVERNVEQAAKDMEKVLAVSLSDIQEDTPLPPSPPSFPFFSKEFLCRHGRDLFSCSASWFLVDIVFYSSNLFQSQIYDRFLPSKQNLNVYQAAFNDAKLQAIVAVCSTIPGYFASVYFIDRMGRVNIQIMGFFFMALGYLAIGIPYDKYWVHGRLNFGFIIIYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKLGAIIGAVGYLWASHNHEMNGYPKGIGMKASLAMLGGVCVLGMMVTYFFTRETMGRSLEENENEDEYRGICVIRCLGDASVCSHPSPREDDDSFSSSTSMETTSNNNINIRTSS 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 200307 202234 - evm.model.ptg000002l.1627 HCH12g0032 554879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH12g0032 551 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH12g0032 551 CDD MFS_PhT 22 490 - -
HCH12g0032 551 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 498 - -
HCH12g0032 551 MobiDBLite consensus disorder prediction 533 551 - -
HCH12g0032 551 FunFam Inorganic phosphate transporter 1-6 17 507 - -
HCH12g0032 551 MobiDBLite consensus disorder prediction 520 551 - -
HCH12g0032 551 Gene3D MFS general substrate transporter like domains 17 508 IPR036259 -
HCH12g0032 551 ProSitePatterns Sugar transport proteins signature 2. 130 155 IPR005829 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH12g0032 551 SUPERFAMILY MFS general substrate transporter 9 501 IPR036259 -
HCH12g0032 551 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0032 HCH-Chr12:200307 HCH5g0093 HCH-Chr5:579772 1.10E-147 dispersed
HCH12g0032 HCH-Chr12:200307 HCH5g0092 HCH-Chr5:576271 3.20E-147 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g0032 K08176 - csv:101218554 788.489