Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH12g0105 | ATGCAAGGCATTTCTTTTTCCTTCTTCCTTTTCGTTGTCGTCGTCTTCCTTATTTCTGCACAAGGTAAACGAGCAGCCGCAGCCGGCAAGAATGGTGTTTATATTGTCTATATGGGAGCGGCATCTACCCCGCATGGCTCATTGAGAACCGACTATCTTCGGCTTCTCAACTCGGTGGCCAGGAAACGAATAAAAGTGGTGCACACGTATAAACATGGCTTCTCGGGATTTGCAGCTCGTCTATCAGAACAGGAAGCCAAGGCCATGAGACAGAGACCTGGAGTTGTTTCTGTTTTTCCAGACCCCCTATTGAAATTGCACACTACTCATTCATGGGATTTCTTAATCAGTCAGACAAGTATAAAGATCGACGCCAAACCCAAATCTGATATCTCTGGCTCTTCTTCTCAAGCATCCGACTCTATTATCGGCATCTTAGACACCGGTGTATGGCCTGAATCAGAGAGTTTTAGTGATGAGGGTATGGGTCCTATACCGTCAAGATGGAAAGGAGTTTGCATGCATGGCGATGATTTCAACTCCTCAAACTGTAACAGAAAACTCATTGGAGCAAGATTCTACGATCATTCTGATGACGGCGGGTTTCAGTTCCATTCACCTCGGGATGATGCTGGCCATGGTACACATGTAGCTTCAACAGCTGCCGGCAGCGCCGTGTCTAATGCATCGTACTATGGGCTTGCCGCGGGGACGGCCAAGGGTGGATCCCCCAAGTCGAGGATTGCTATGTATCGAGTATGTACAGTTCAAGGCTGCACTGGATCAGCCATCATGGCAGCCTTTGATGATGCGATCGCTGATGGTGTCAATGTGTTATCGTTATCGCTTGGTTCACCGTATTTCTTTAAACAGGAATTGAAAGATGACCCGATTGCGATCGGAGCTTTTCATGCAGTGGAGAAGGGGATTATAGTCGTCTGCTCTGCGGGAAACGACGGCCCCGTCACAGCATCAGTGGTGAATGACGCACCATGGATTTTAACCGTGGCTGCATCCACCATTGATCGGGATTTCGAGTCCAACGTTGTGTTGGGCAATAACAAAGTAATCAAGGGAGAAGGTATAAATTTCTCTGCTCTCCAAAAATCTGCTACATATCCACTGATACAGGGAAAGTCAGCCAAGAAGTGGAATGACAGTGAAGATGAAGGAGCTAGGGTTTGTAACGAATCATCAATGGACGGAAATTTGGTGAAGGGGAAGATAGTGATATGTGAGACTATTGAAGGACAAGGTCCGTCTTGGGAACTTAGAGTTGAAGCAGTGAAGAATCTTGGAGGGGTTGGCATAGTTTTCATTAATGATGAATCAAAATTAGTTGCAGATAAGTTTGGTTATTTTCCCATGACAGCTATTAGTTCAAAAGATGGCGATGAGGTCCTCTCTTATGCCAACTCAACCAGGAACCCACTCGCTACAATCCTACCCACCGTGACCGTAATAAAATACAAGCCAGCGCCTGCTGTAGCATATTTTTCATCCAGAGGACCTAACCCTGCTGCACTAAATATACTCAAGCCTGATATATTAGCACCAGGAGTGAACATTCTTGCAGCCTGGCTAGGCAATGACACGGCGGCTTCTCTAGAAGGAAAACCACCTCCACTCTTCAACGTGCTCTCAGGAACTTCAATGGCCTGCCCTCACGTCTCTGGTGTTGCAGCCTTTGTTAAATCTCAAAACCCCTCATGGGGTCCCTCAGCAATCAGGTCAGCTATCATGACAACAGCAATCCAAACAAATAACCTAGGATCTCCAGTCACAACAGATTCCGGGTCACTTGCGACGCCTTTTGATTATGGGGCCGGAGAAGTATCGACAACTGGACCATTACAACCCGGCCTTGTCTACGAAACCAGTACAATAGACTACTTAAACTATCTTTGCTACCGTGGTTACGACCTTCCCACCGTTAAGATGATCTCCCAAACAGTTCCAAATGACTTTGTCTGCCCAAAGAATTCGACTGCCGATATATCTAATATCAACTATCCATCAATAGCAGTGTCCGAAATGAAAGGTAAGGAAAGCAAGACAGTAAGCAGGACAGTTACAAATGTTGGTGGCGATGGTGAAACAGTTTACACAGTCAGTGTGGAGGCACCTAGTGAAGTAGAAGTTAAGGTGATTCCAGAGAAACTGGAATTCACAAAGAACAACCAAAAGCAGAGTTACCAAGTGGTCTTCACCTCAACTGCAGCCACTCCAAAGGATGAACTCTTTGGATCAATTACTTGGACCAACGGAAAATATCGTGTTCGGAGTCCATTTGTTGTAAGTAGTAAAAGTAGTGAGGACGATTATTACTCATAA | 2334 | 45.8 | MQGISFSFFLFVVVVFLISAQGKRAAAAGKNGVYIVYMGAASTPHGSLRTDYLRLLNSVARKRIKVVHTYKHGFSGFAARLSEQEAKAMRQRPGVVSVFPDPLLKLHTTHSWDFLISQTSIKIDAKPKSDISGSSSQASDSIIGILDTGVWPESESFSDEGMGPIPSRWKGVCMHGDDFNSSNCNRKLIGARFYDHSDDGGFQFHSPRDDAGHGTHVASTAAGSAVSNASYYGLAAGTAKGGSPKSRIAMYRVCTVQGCTGSAIMAAFDDAIADGVNVLSLSLGSPYFFKQELKDDPIAIGAFHAVEKGIIVVCSAGNDGPVTASVVNDAPWILTVAASTIDRDFESNVVLGNNKVIKGEGINFSALQKSATYPLIQGKSAKKWNDSEDEGARVCNESSMDGNLVKGKIVICETIEGQGPSWELRVEAVKNLGGVGIVFINDESKLVADKFGYFPMTAISSKDGDEVLSYANSTRNPLATILPTVTVIKYKPAPAVAYFSSRGPNPAALNILKPDILAPGVNILAAWLGNDTAASLEGKPPPLFNVLSGTSMACPHVSGVAAFVKSQNPSWGPSAIRSAIMTTAIQTNNLGSPVTTDSGSLATPFDYGAGEVSTTGPLQPGLVYETSTIDYLNYLCYRGYDLPTVKMISQTVPNDFVCPKNSTADISNINYPSIAVSEMKGKESKTVSRTVTNVGGDGETVYTVSVEAPSEVEVKVIPEKLEFTKNNQKQSYQVVFTSTAATPKDELFGSITWTNGKYRVRSPFVVSSKSSEDDYYS | 777 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 559257 | 562663 | + | evm.model.ptg000002l.1554 | HCH12g0105 | 554952 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH12g0105 | 777 | Gene3D | - | 635 | 769 | - | - | |
HCH12g0105 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 138 | 157 | IPR015500 | - | |
HCH12g0105 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 209 | 222 | IPR015500 | - | |
HCH12g0105 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 548 | 564 | IPR015500 | - | |
HCH12g0105 | 777 | SUPERFAMILY | Protease propeptides/inhibitors | 51 | 103 | - | - | |
HCH12g0105 | 777 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 213 | 223 | IPR022398 | - | |
HCH12g0105 | 777 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 107 | IPR037045 | - | |
HCH12g0105 | 777 | Pfam | PA domain | 392 | 466 | IPR003137 | - | |
HCH12g0105 | 777 | FunFam | Subtilisin-like protease SBT1.5 | 140 | 353 | - | - | |
HCH12g0105 | 777 | Gene3D | - | 342 | 488 | - | - | |
HCH12g0105 | 777 | FunFam | subtilisin-like protease SBT1.5 | 342 | 488 | - | - | |
HCH12g0105 | 777 | Pfam | Subtilase family | 141 | 610 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
HCH12g0105 | 777 | CDD | Peptidases_S8_3 | 104 | 585 | IPR034197 | - | |
HCH12g0105 | 777 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 111 | 618 | - | - | |
HCH12g0105 | 777 | Pfam | Fibronectin type-III domain | 668 | 766 | IPR041469 | - | |
HCH12g0105 | 777 | Pfam | Peptidase inhibitor I9 | 33 | 107 | IPR010259 | - | |
HCH12g0105 | 777 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 33 | 764 | IPR045051 | - | |
HCH12g0105 | 777 | SUPERFAMILY | Subtilisin-like | 136 | 618 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
HCH12g0105 | 777 | CDD | PA_subtilisin_like | 348 | 481 | - | - | |
HCH12g0105 | 777 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 549 | 559 | IPR023828 | - | |
HCH12g0105 | 777 | Gene3D | Peptidase S8/S53 domain | 141 | 631 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH12g0105 | HCH-Chr12:559257 | HCH3g1044 | HCH-Chr3:14891858 | 5.60E-150 | dispersed | |
HCH4g0176 | HCH-Chr4:1019481 | HCH12g0105 | HCH-Chr12:559257 | 2.40E-188 | transposed | |
HCH6g1198 | HCH-Chr6:46399040 | HCH12g0105 | HCH-Chr12:559257 | 1.50E-48 | transposed | |
HCH12g0105 | HCH-Chr12:559257 | HCH2g0544 | HCH-Chr2:49248762 | 1.40E-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH12g0105 | K25898 | - | csv:101213415 | 1119.38 |