Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH12g0214 | ATGTATCTCCTTTCCGTTACACTCATAATTTCCGTTCCTCTTTCCATCCTCCTGAAATTTCTATACTCAATTATATGGGTCCCATGGAGGATTCAAATCCACTTCCAAAAGCAAGGTGTAACAGGCCCTCGCTATCGTCCGATGGTCGGAAACTCGGCCGAGATCCGCCGTCTATTCGCCGAAGCTCAATCGAAGCCAATCCCCTTCCACCACGACATACTTTGTCGGGCTGCTCCGTTTTATTTCCGGTGTTCTGGAATTTACGGGAAAACGTTTCTGTACTGGTTCGGGGCAAAACCGAGACTGGCTATATCCGACCCGGATGTGATAAAGGAGGTGTTAATGAGTACGGGTGGGTATTTTCGGAAGGTCGGGTTTAACCCGTTGTCAAAGATGCTTTTTGGACAGGGACTTGTTGGGCTGGATGGAGAAAAATGGGTCACGCATAGGAGGATCGCAAACCAGGCCTTTAGCATGGACCGTGTGAAGGGTTGGCTACCTGAAATTACTGTCAGTGCCTCAAATATGTTGAGGAGATGGGATGAGATCAAAGGAGGAATGGAGGAATTGGAATTGGACGTGCACAAAGAGTTCCGCGACCTCTCGGCGGACATAATATCAAGAACGGCATTTGGAAGTAATTTCGAAGAAGGCAAACGGATCTTCAATTTACAAGAACAGCAAATGCATCTCTTCTCTCAGGCAATCAGAAGTGTTTACATTCCTGGGTTCAGATTTTTGCCAACCAAAAAGAATAGAGAAAGATGGAGTCTAGAGAAAGAGACTCGAGATTCCATCAAAGTGCTGATTGAGAAAAACAGCAGAGGGAGGGAAAATTCAACCAATCTGCTTAGCCTCTTCATGTCATCTTATAAGAAGCAGAATGGAGAAGAAGAGAAACTTGGAACAACTGCTCATCTTCTAACATGGGCACTTCTCCTTTTGGCAAAGCATCAGGAATGGCAAGACAAAGCCCGTGAAGAAGTCGTTCGCGTCTGTGGGCGCAAAACGCCACCTGCAGCAGAGAGTTTGAGTGAACTTAAACTTGTGAGTATGATAATTAACGAAACGCTTCGGCTTTATCCTCCAGCAGTGATGTTGATGAGGCAGACGGCAAAACGACTGACGCTCGGAAGCTTAGACGTTCCAGCAGGCACACAGCTCTACTTGGCATTGACGGCGGTTCATCACGACACTGATATTTGGGGAGAAGATGCAAACAGTTTCAACCCTTTGAGATTCGGCGAAGCTCGAAAGCATCTGGCTTCGTTTCTACTGTTTTCATTGGGACCCCGAAACTGCGTAGGCCAAACCTTGGCGTTGGTCGAGGCCAAAGTAGTTCTGGCCATGATAATTCAACAGTTTTCTGTTGCTGTTTCTCCAACCTACACTCACTCTCCTATGCTGTTTGTAAGCTTGCAGCCTCAGTTTGGTGCTCAAATCCTCATTAGGAGTCTATGGAACTGA | 1467 | 46.63 | MYLLSVTLIISVPLSILLKFLYSIIWVPWRIQIHFQKQGVTGPRYRPMVGNSAEIRRLFAEAQSKPIPFHHDILCRAAPFYFRCSGIYGKTFLYWFGAKPRLAISDPDVIKEVLMSTGGYFRKVGFNPLSKMLFGQGLVGLDGEKWVTHRRIANQAFSMDRVKGWLPEITVSASNMLRRWDEIKGGMEELELDVHKEFRDLSADIISRTAFGSNFEEGKRIFNLQEQQMHLFSQAIRSVYIPGFRFLPTKKNRERWSLEKETRDSIKVLIEKNSRGRENSTNLLSLFMSSYKKQNGEEEKLGTTAHLLTWALLLLAKHQEWQDKAREEVVRVCGRKTPPAAESLSELKLVSMIINETLRLYPPAVMLMRQTAKRLTLGSLDVPAGTQLYLALTAVHHDTDIWGEDANSFNPLRFGEARKHLASFLLFSLGPRNCVGQTLALVEAKVVLAMIIQQFSVAVSPTYTHSPMLFVSLQPQFGAQILIRSLWN | 488 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 1197034 | 1204545 | + | evm.model.ptg000002l.1445 | HCH12g0214 | 555061 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH12g0214 | 488 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | PRINTS | P450 superfamily signature | 299 | 316 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | PRINTS | P450 superfamily signature | 425 | 434 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | PRINTS | P450 superfamily signature | 434 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 427 | 436 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
HCH12g0214 | 488 | PRINTS | E-class P450 group I signature | 85 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | PRINTS | E-class P450 group I signature | 434 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | PRINTS | E-class P450 group I signature | 308 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | PRINTS | E-class P450 group I signature | 424 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | Gene3D | Cytochrome P450 | 25 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | SUPERFAMILY | Cytochrome P450 | 42 | 483 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH12g0214 | 488 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 478 | IPR050665 | GO:0004497(PANTHER) | |
HCH12g0214 | 488 | Pfam | Cytochrome P450 | 81 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH12g0214 | HCH-Chr12:1197034 | HCH8g0803 | HCH-Chr8:44636767 | 3.10E-106 | dispersed | |
HCH12g0214 | HCH-Chr12:1197034 | HCH10g0437 | HCH-Chr10:3478798 | 1.40E-109 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH12g0214 | - | - | - | 0.0 |