Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0234 | ATGGCGACTACCACCACCACCATGGCTGGAATCTTCACCATTTTCTTGTTTCTCTACGCTCTCTTCCAAAGAAGAAGAAGATTCACTACCCCTCAAAAGAGACTCCCACCTGAAGCCGGCGGTGCTCTGCCTCTGATCGGCCACCTCCACCTTCTAAGCAACGCAGAACCAACCCACAAAACCTTAGCAAAAATGGCAGATACGTACGGACCAATCTTTTCATTAAAACTGGGTATGTTTAAAGCATTAGTTGTGAGCAATTGGGAAATAGCAAGAGAGTGTTTTACAACTCACGACAAAACATTCGCTTCTCGTCCCAAAGTTGCCGCCGCCGAGCTCCTTGGTTACGATTACGCCTTGTTTGGTTTCAGCCCATACGGACCGCATTGGCGCCACGTCCGTAAAATTGCGACGCTTCAAGTTCTTTCAAACCATCGGCTGCAGCTTCTTCAACATATCCGAGCTCTCGAAGTCCAGAGTTGGATAAAAGAAATATATGATATTTGCGTCGAAAATGGAAGTGGTAAAGCGGTGGTGGAGATGAAGAAATGGTTTGGAGATGTGATTTTGAATACGATATTTAAGATGGTTGTGGGGAAGAGATTCACGTCTGCTTTTGAAGGAGTTGGTGATGAAAAATATAGAAAGGCGTTGAGGGATTTCTTTGAGTTGTGTGGGATTTTTGTGGTGTCAGATTCTATGCCATATTTGAAATGGTTTGATTTTGGAGGGCATCAAAAGGCCATGAAGAAGACAGGGGAAGAGCTGGATGAGGTTTTTGATAAATGGCTCAAAGAGCATCGGCAGAGGAGAAGCTCTGGTGAGGTTAAGACTGATAATGATTTCATGGATGTCATGTTGTCTAGCGTTGAAGATGGTGTGGAATTTTCACAATATGATGCTGACACAATCATCAAATCTACATGCTTGGCTTTAATATTAGCTGGATCAGATACCACATCAGCAACAATGATATGGGCTCTCTCTTTACTCCTCAATAATAAAGAAGCACTCAAGAAGGCCCAACTTGAATTGGATGAAAAAATTGGGAGAGAAAGAAAAGTAAAAGATTCAGATGTGAAAAATCTAACATATCTTCAAGCCATCGTGAAGGAAACATTGCGTTTATATCCTGCTGCTCCCCTCTTGATCGCTCATCAGTCCATACAAGATTGTGAAGTTGCTGGCTACCATATTGCTGCAGGAACCAGGCTATTTGTGAATGCTCAAAAGCTCCAAAACGATCCATTGGTATGGGAAAATCCCTGTGAATTTCGACCAGAAAGATTTATGAATAATGATTTTGATGTCAAAGGACAGAGCCCACAACTGATACCATTTGGAAGTGGGCGAAGAATGTGCCCTGGAGTTTCTTTTGCCCTTCAAGCCATGCATCTTACGCTTGCTAATTTGCTTCATGGATTTGAAATTGGTGCACCGTCGTCGTCTCATGGACCTGCTAATATGGAGGAGAGTCTTGGATTGACCAGTGTTAAAAAAACTCCATTAGAGGTTGTTTTAACTCCACGCCTTCCTCCTCGTTTTTATTAA | 1551 | 42.81 | MATTTTTMAGIFTIFLFLYALFQRRRRFTTPQKRLPPEAGGALPLIGHLHLLSNAEPTHKTLAKMADTYGPIFSLKLGMFKALVVSNWEIARECFTTHDKTFASRPKVAAAELLGYDYALFGFSPYGPHWRHVRKIATLQVLSNHRLQLLQHIRALEVQSWIKEIYDICVENGSGKAVVEMKKWFGDVILNTIFKMVVGKRFTSAFEGVGDEKYRKALRDFFELCGIFVVSDSMPYLKWFDFGGHQKAMKKTGEELDEVFDKWLKEHRQRRSSGEVKTDNDFMDVMLSSVEDGVEFSQYDADTIIKSTCLALILAGSDTTSATMIWALSLLLNNKEALKKAQLELDEKIGRERKVKDSDVKNLTYLQAIVKETLRLYPAAPLLIAHQSIQDCEVAGYHIAAGTRLFVNAQKLQNDPLVWENPCEFRPERFMNNDFDVKGQSPQLIPFGSGRRMCPGVSFALQAMHLTLANLLHGFEIGAPSSSHGPANMEESLGLTSVKKTPLEVVLTPRLPPRFY | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 1301175 | 1303180 | - | evm.model.ptg000002l.1425 | HCH12g0234 | 555081 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0234 | 516 | CDD | CYP82 | 70 | 510 | - | - | |
| HCH12g0234 | 516 | Gene3D | Cytochrome P450 | 31 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | SUPERFAMILY | Cytochrome P450 | 42 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 408 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 188 | 206 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 454 | 477 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 90 | 111 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 304 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 324 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | E-class P450 group I signature | 444 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | Pfam | Cytochrome P450 | 40 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0234 | 516 | PANTHER | CYTOCHROME P450 82C3-RELATED | 10 | 512 | IPR050651 | - | |
| HCH12g0234 | 516 | FunFam | Cytochrome P450 82C4 | 26 | 508 | - | - | |
| HCH12g0234 | 516 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | P450 superfamily signature | 445 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | P450 superfamily signature | 454 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0234 | 516 | PRINTS | P450 superfamily signature | 315 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0234 | HCH-Chr12:1301175 | HCH12g0236 | HCH-Chr12:1313793 | 7.70E-212 | dispersed | |
| HCH12g0234 | HCH-Chr12:1301175 | HCH12g0235 | HCH-Chr12:1311509 | 3.80E-219 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0234 | - | - | - | 0.0 |