Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0235 | ATGGAACCTCCATTCTTCACCACCATAGCTGATTTCGTAGCCATTTTCTTGTTCTTCTTCTGTACCCTTCTCCAGATATCCAAAAGATTCATTACTCCTCATAAGAATCTCCCACCTGAAGCCAGCGGTGCTCTGCCGCTGATCGGCCATCTCCACCGTCTAAGCACAAAAGAACCAACCCACATAACCTTGGCAAACATGTCGGATTTGTACGGACCAATCTTTACATTAAGATTAGGTATGAAAAAAGCAGTGGTTGTGAGCAACTGGGAAATAGCAAGAGAGTGTTTTACAACTCACGACAAAACATTTGCCTCTCGTCCAAAGCTTTTAGCCACAAAGATTCTAGGTTATGATTACGCCATGTTAGGGTTTAGCCCATATGGTCCGTACTGGCGCCATGTTCGTAAATTAGCTTCTGTGGAACTCCTCTCAAATCGCCGCCTAGAGCTTCTCCAACATATCAGAATCTCCGAGGTCAAGAATTTGATTAAAGAACTATACTGTTTTTGGGTCGAAAGTAGAAATAATCATGGTGACGGTAAAGTGGTCGTGGAGATGAAGAAATGGTTCGGAGACGTAACTTTGAATACGATATTCAGGATGGTGGTCGGAAAGCGATTCGTGGCGGCTTTCGACGGTGTGGGTAATGAACGGTATCGGAAGGCGTTGAGGGATTTCTTTGAGTTTTGTGGGGTATTCGTGGTGTCAGATTCGTTCCCATTTCTGAAATGGTTGGATTTAGGAGGGCATGAGAAAGCAATGAAGAAAACGGCGAAAGAATTGGATGAGGTTTTTGATAAATGGCTCAAAGAGCATCGGGAGAGGAGAAACTCCGGTGAGGTTAAGACTGAGAATGATTTCATGGATGTGATGTTGTCAATTGTTGAAGATGATGGAGATGATTCCGGCTATGATGCAAATCGGATGATCAAAGCCACATGCTTAGCAATGATTTTAGGTGGATCAGACACAACCACAGTAACAATGACATGGGCTCTTTCTTTACTCCTCAATCATCAAGAATCGCTCAAAAAGGCTCAACTTGAAATAGAAAAACAAATTGGAAGAGAAAGACAAGTGAAAGAATCAGATTTGAAAAACCTGATATATCTTGAAGCAATCATAAAAGAAACACTACGTTTATATCCTGCAGCACCACTGTTAGCTCCTCATGAATCCATGGAAGATTGCAGGATAGCCGGTTATCACATCCCAGCAAGGACACGTCTTTTAGTGAATCTTCAAAAGCTTCAAAGAGATCCAGTTATATGGGAGGATCCCTGTGAATTTAGACCAGAAAGGTTTCTAAATGAGAAGAAGGATTTTGATGTGAGAGGAAAAACTCCACAACTGATACCATTTGGAAGTGGAAGAAGAATGTGCCCTGGGATCCCATTTGCTCTTCAAACAATGCATCTTACGCTTGCTAATCTACTTCATGGATTTGAATTTGGTTGCCCATCTGATGAACCAATTGATATGGAGGAGAGTATTGGATTGACTAGTATTAAAACAACCTCATTGGAGGTTGTTTTAACTCCACGTCTCTCGCCTCATGTATATGAACAAATGTAA | 1578 | 41.76 | MEPPFFTTIADFVAIFLFFFCTLLQISKRFITPHKNLPPEASGALPLIGHLHRLSTKEPTHITLANMSDLYGPIFTLRLGMKKAVVVSNWEIARECFTTHDKTFASRPKLLATKILGYDYAMLGFSPYGPYWRHVRKLASVELLSNRRLELLQHIRISEVKNLIKELYCFWVESRNNHGDGKVVVEMKKWFGDVTLNTIFRMVVGKRFVAAFDGVGNERYRKALRDFFEFCGVFVVSDSFPFLKWLDLGGHEKAMKKTAKELDEVFDKWLKEHRERRNSGEVKTENDFMDVMLSIVEDDGDDSGYDANRMIKATCLAMILGGSDTTTVTMTWALSLLLNHQESLKKAQLEIEKQIGRERQVKESDLKNLIYLEAIIKETLRLYPAAPLLAPHESMEDCRIAGYHIPARTRLLVNLQKLQRDPVIWEDPCEFRPERFLNEKKDFDVRGKTPQLIPFGSGRRMCPGIPFALQTMHLTLANLLHGFEFGCPSDEPIDMEESIGLTSIKTTSLEVVLTPRLSPHVYEQM | 525 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 1311509 | 1313383 | - | evm.model.ptg000002l.1424 | HCH12g0235 | 555082 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0235 | 525 | FunFam | Cytochrome P450 82C4 | 29 | 514 | - | - | |
| HCH12g0235 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 455 | 464 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0235 | 525 | CDD | CYP82 | 72 | 516 | - | - | |
| HCH12g0235 | 525 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | Gene3D | Cytochrome P450 | 29 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 518 | IPR050651 | - | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 414 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 92 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 194 | 212 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | SUPERFAMILY | Cytochrome P450 | 43 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0235 | 525 | Pfam | Cytochrome P450 | 43 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0235 | HCH-Chr12:1311509 | HCH12g0670 | HCH-Chr12:4095373 | 3.20E-157 | dispersed | |
| HCH12g0234 | HCH-Chr12:1301175 | HCH12g0235 | HCH-Chr12:1311509 | 3.80E-219 | tandem | |
| HCH12g0235 | HCH-Chr12:1311509 | HCH12g0236 | HCH-Chr12:1313793 | 3.20E-221 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0235 | - | - | - | 0.0 |