Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g0291 ATGGCTCCAAGATTGGGCTTTTCATGGTGGTGGGGAGAAAATACTCAAAGGGGAACACCAGTGGTTGTCACTATGGAAAAACCAAACTTCTCCGTCGTGGAGATTGACGGCGCCGACGCCGCATTCCGGCCGGTGGAGAAAAGTAGGGGAAAGAATGCCAAACAAGTTACTTGGGTTCTTCTTCTTAAGGCCAATAGAGCTGTCGGTTGCATAACTTGGCTTGCTACTGTCCTTTGGACATTGCTAGGAACCATCAAGAAGAGGCTAATCTATAGGCAGGGAGTAGATATTGAGAATGAGAAATTGGGTAAAGGGAAGTTATTGTTTGGAGTAATTAGAGTTTTTTTAGTAACTTCCTTGGCAATTCTGGCTTTTGAAATTCTTGCTTATTTCAAAGGCTGGCATTATTTTCAAAATCCAAATCTTCACCTTCCTCAGGCTTCTGATTTACAAGGATTGCTTCATACACTTTATGTTACATGGTTAACTTTCCGGGCTGATTACATTGCTCCTCTTATTCAAACACTATCTAAATTTTGCATTGTTCTGTTTCTTATCCAATCGTTGGATCGTATGGTGCTATCCTTTGGTTGCCTATGGATAAAGTACAAGAGAATTGAACCCAAGATAGAGGGAGATCCCTTCAAGTTGAATGATGTAGAGGGAGCCGGGTGCAAGTATCCGATGGTTCTCGTTCAGATACCGATGTGCAACGAGCGGGAGGTTTATGAGCAATCTATTTCTGCAGTCTGTCAGATCGATTGGCCGAAGGACAATTTACTAATTCAAGTTCTTGATGATTCTAGTGATGAGAGCATCCAAATGTTAATCAAGGCAGAGGTTGCAAAATGGAGCCAGAAAGGGGTCAACATAATCTATCGCCATCGATTACTAAGAACTGGTTACAAAGCTGGGAACCTCAAGTCTGCAATGAGTTGTGATTATGTCCAAGGTTATGAGTTTGTAGCAATTTTCGATGCCGACTTTCAACCAAATCCAGATTTTCTTAAACTGACAATTCCCCATTTCAAGGACAACCCGGAATTAGGTTTGGTTCAGGCTAGATGGGCTTTTGTGAACAAGGATGAAAACCTATTGACGCGTCTTCAAAATATTAACTTGTGTTTTCACTTTGAGGTGGAACAGCAGGTTAATGGAGTATTCCTTAATTTCTTTGGCTTCAATGGCACTGCTGGTGTTTGGAGAATTAAAGCCCTTGAAGAGTCTGGAGGGTGGCTTGAAAGGACAACTGTAGAAGACATGGACATAGCTGTGAGGGCCCATCTTAATGGCTGGAAGTTTATATTTCTTAATGATGTGAAGGTCCTCTGTGAAGTTCCCGAGTCGTATGAAGCTTACAAGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTATTCAGGTTGTGTCTCCCAGCAATTATAACTTCTAAGATATCAGCATGGAAGAAGGCAAATTTGATATTATTATTCTTTCTACTAAGGAAGCTTATTCTTCCATTTTATTCTTTCACTTTATTCTGCATAATTCTTCCTCTAACCATGTTTGTCCCAGAAGCTGAACTTCCCGTATGGATAATCTGTTATGTGCCTATTTTTATGTCATTTCTGAACATTCTTCCATCCCCGAAATCTTTTCCTTTTATCGTTCCGTATCTTCTATTTGAAAACACAATGTCTGTCACCAAGTTCAATGCCATGATATCTGGGTTATTCCAGTTAGGTAGCTCTTATGAGTGGATTGTAACAAAAAAGGCTGGCAGGTCATCAGAATCTGACCTACTGGCAGCTGCTGAAAGGGAGTCGAAGATTGCGAATCAAGCGCAGATCTATAGAGGGGCTTCTGAGAGTGATCTTTCTGAGTTGAACCGCTTAAGAGAACAGAAGGAAGTAGCTATTGCACCTATCAAAAAAGTTAACAAGATATACAAGAAAGAGCTCGCGCTTGCATTTCTTTTACTTGTAGCTTCAATCAGGAGTCTCTTGGCAGCACAAGGAGTCCACTTCTACTTCTTGCTGTTCCAAGGTGTGACCTTCCTCCTTGTAGGTCTTGATCTAATTGGGGAGCAAATGAGCTGA 2082 41.45 MAPRLGFSWWWGENTQRGTPVVVTMEKPNFSVVEIDGADAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLATVLWTLLGTIKKRLIYRQGVDIENEKLGKGKLLFGVIRVFLVTSLAILAFEILAYFKGWHYFQNPNLHLPQASDLQGLLHTLYVTWLTFRADYIAPLIQTLSKFCIVLFLIQSLDRMVLSFGCLWIKYKRIEPKIEGDPFKLNDVEGAGCKYPMVLVQIPMCNEREVYEQSISAVCQIDWPKDNLLIQVLDDSSDESIQMLIKAEVAKWSQKGVNIIYRHRLLRTGYKAGNLKSAMSCDYVQGYEFVAIFDADFQPNPDFLKLTIPHFKDNPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYKKQQHRWHSGPMQLFRLCLPAIITSKISAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWIICYVPIFMSFLNILPSPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSSYEWIVTKKAGRSSESDLLAAAERESKIANQAQIYRGASESDLSELNRLREQKEVAIAPIKKVNKIYKKELALAFLLLVASIRSLLAAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1647979 1650882 + evm.model.ptg000002l.1368 HCH12g0291 555138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH12g0291 693 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 447 IPR029044 -
HCH12g0291 693 FunFam probable xyloglucan glycosyltransferase 5 221 446 - -
HCH12g0291 693 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 149 692 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
HCH12g0291 693 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 529 IPR029044 -
HCH12g0291 693 Pfam Glycosyl transferase family group 2 322 523 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0291 HCH-Chr12:1647979 HCH13g0797 HCH-Chr13:7679576 1.80E-272 dispersed
HCH12g0291 HCH-Chr12:1647979 HCH12g0532 HCH-Chr12:3125612 3.80E-267 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g0291 - - - 0.0