Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH12g0426 | ATGGGTATATACCTCAGCAGTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAGAGTGATAGGCTTAAATATGGTCTATCATCGATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCATATCCTAGTTTGGATTCCTGCACTTCCTTCTTTGGTGTTTACGATGGCCATGGAGGTAAGGTGGTTGCAAAGTTCTGTGCCAAGTATCTTCACCAACAAGTGATGAAAAATGAAGCTTATGTGGCGGGAGATATTGAAACTTCTGTGCAGAAAGCATTTTTCAGAATGGATGAAATGATGCGTGGACAAAGAGGTTGGAGAGAATTAGCCGTTTTGGGTGATAGAATAAACAAGTTCACTGGCATGATTGAAGGGTTGATATGGTCACCGAGAAGCAGTGATGCAAATTACCAGGCTGATGATTGGGCTTTTGAGGAGGGTCCACACTCTGATTTTACGGGCCCAACTTCAGGATGTACAGCTTGTGTTGCAATTCTTAGAAATAGCAAACTCGTTGTTGCAAATGCAGGCGATTCTCGTTGTGTGATATCAAGAAAGGGTCAGGCTCACAACCTCTCTAGAGATCACAAGCCTGATCTTGAAGTTGAGAGGGAAAGAATTCTGAAAGCTGGGGGTTTTATTCATGCCGGGCGAGTCAATGGTAGCTTGAACCTTGCCAGAGCAATTGGTGATATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAAATTGTCACTGCAAATCCTGATGTAATCACTGTTGAGCTTTGTGATGACGACGATTTTATTGTTCTAGCATGCGATGGCATATGGGATTGCATGTCTAGCCAGCAACTGGTAGATTTTATACATGAACAGCTGAAATCAGAAAGTAAACTCTCTGCAGTTTGTGAGAGAGTACTTGATAGGTGTTTGGCACCTTCCACAGCTGGTGAGGGATGTGATAACATGACAATGATCTTGGTGCAGTTTAAGAAACCCATCCAATCGAACAACATCGGTGCTAATGAGCAATCTTCACCGTCCGCCAATCCGGAAAATACTGATACAAAGCAAGCCGATGAGTCGAACCAGTGA | 1089 | 43.16 | MGIYLSSPKTEKFSEDGESDRLKYGLSSMQGWRATMEDAHAAYPSLDSCTSFFGVYDGHGGKVVAKFCAKYLHQQVMKNEAYVAGDIETSVQKAFFRMDEMMRGQRGWRELAVLGDRINKFTGMIEGLIWSPRSSDANYQADDWAFEEGPHSDFTGPTSGCTACVAILRNSKLVVANAGDSRCVISRKGQAHNLSRDHKPDLEVERERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDVITVELCDDDDFIVLACDGIWDCMSSQQLVDFIHEQLKSESKLSAVCERVLDRCLAPSTAGEGCDNMTMILVQFKKPIQSNNIGANEQSSPSANPENTDTKQADESNQ | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2465023 | 2469920 | - | evm.model.ptg000002l.1233 | HCH12g0426 | 555273 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH12g0426 | 362 | SMART | PP2C_SIG_2 | 28 | 328 | IPR001932 | - | |
HCH12g0426 | 362 | CDD | PP2Cc | 23 | 328 | IPR001932 | - | |
HCH12g0426 | 362 | SUPERFAMILY | PP2C-like | 3 | 329 | IPR036457 | - | |
HCH12g0426 | 362 | MobiDBLite | consensus disorder prediction | 335 | 362 | - | - | |
HCH12g0426 | 362 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169(InterPro) | |
HCH12g0426 | 362 | PANTHER | PROTEIN PHOSPHATASE 2C | 19 | 329 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
HCH12g0426 | 362 | Gene3D | - | 1 | 329 | IPR036457 | - | |
HCH12g0426 | 362 | Pfam | Protein phosphatase 2C | 23 | 104 | IPR001932 | - | |
HCH12g0426 | 362 | Pfam | Protein phosphatase 2C | 136 | 314 | IPR001932 | - | |
HCH12g0426 | 362 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 328 | IPR001932 | - | |
HCH12g0426 | 362 | SMART | PP2C_4 | 11 | 326 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH12g0426 | HCH-Chr12:2465023 | HCH4g1111 | HCH-Chr4:7273095 | 9.30E-31 | dispersed | |
HCH12g0048 | HCH-Chr12:251006 | HCH12g0426 | HCH-Chr12:2465023 | 2.60E-31 | transposed | |
HCH12g0426 | HCH-Chr12:2465023 | HCH4g1258 | HCH-Chr4:8649790 | 5.30E-167 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH12g0426 | K17499 | - | mdm:103442179 | 627.476 |