Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0584 | ATGGCATATCTCTTGCACTCCACTTTCACTATCCCTCTCCTTTTCTTTCTTTTATTTCCCTTCCTCGTTTGGAAATTCCTTAAACTCCACAAATTGAAGCACATAAAACTTCCACCAAGTCCTCCTTCCATTCCTATCATCGGCCACCTTCATCTTCTAAAAGACCCTCTTCACCGAATTCTGCAAAATCTATCAAATAAATATGGTCCAATCTTATCACTTTCATTCGGCTCCCGTCCCGTTATTGTTATATCCTCCCCCACCGCCGTGCAAGAGTGCTTCACCAAGAATGATATTATTTTTGCCAATAGACCTCGTTTGCTTGCTGGGAAGATCCTTAACTACAACTTCTCTTCTATGAGCTTCGCCCCTTACGGCGACCATTGGCGCAACTTACGTCGTTTCGCTATGACCGAACTACTCTCCACTCATCGTCTCGATATGTTTGTAAACATTCGAGAGGCGGAATTCAAGTTATGGCTTAAAAGTTTGTTTGTAATTACGAGAAGAGGTTGTGTTCAAGTGGAGATGAGGTCCAAATTGAATGAGCTGTCTTTTAATATTGTCATGAGGATGATAAGTGGGAAACGCTACTTTGGACTTCAAGTGGAAGATTCTGAAGAGGCGAGGGAGTTCATGGAGATTATGAAGGAAATTTTACTACTAAACGGAGCGTCAAATCTTGGTGATTATTTGCCAATTTTAAGACTTTTTGATTTCCAAGGACTTGAAAAGAGGATGTTGAAATTGCGGGATCGTGCTGACGGATTCCTACAAAACCTGGTTGATAGACATCGAGAAAAGAAAACTTCAAATTCTAAAGAAAAAGATAGAAAGAATATGATCGACAATCTGCTGTCGTTACAAGAATCAGATCCTGATTATTACACTGATGATATTATCAAAAGTCTTGTTTTAACTATGTTAGCTGGTGGGACTGATACAACAACGGGGACTATTGAGTGGGCTTTTTCGCTTCTTCTAAACCATCCTTTAGTAATGAAAAAGGCTTTGACTGAGATAAGAGAGTGTATCAGTCACCATAGACTTGTGGATGAAGGAGATCTTAGCAGGCTACCATATCTTCAAGCTATAATCAATGAGACCTTACGGTTGTTTCCGGTAGCCCCGGTGTCGATTCGGGAATCATCCGAAGACTGTACAATCGATGGATTTTACGTGCCAAAAGGAACAATGTTGATGGTTAATATATGGGCTATCCATAGGGATTCAAAAGTGTGGGAGGATCCAACAAGTTTTAGACCGGAGAGATTTGGAGAATTGGAACAAGTTGAAAGAATTGGCAAATTGATACCATTTGGGATGGGGAGGAGGGCATGTCCAGGGGCTGGTCTTGCACATCGGGTGGTGGGATTGACATTGGCTGCTCTTATTCAATGCTTCGAGTGGGAGAGAATTGATGATGAGGAAATAGATTTGTCTCAAGGATCTGGAATCACCATGCCAAAAGCTAAGGCTTTAGAGGCAATGTGCAGAGTTCGTACTTCAATTGTTGATGTTCTATCTGGACTTTGA | 1536 | 41.28 | MAYLLHSTFTIPLLFFLLFPFLVWKFLKLHKLKHIKLPPSPPSIPIIGHLHLLKDPLHRILQNLSNKYGPILSLSFGSRPVIVISSPTAVQECFTKNDIIFANRPRLLAGKILNYNFSSMSFAPYGDHWRNLRRFAMTELLSTHRLDMFVNIREAEFKLWLKSLFVITRRGCVQVEMRSKLNELSFNIVMRMISGKRYFGLQVEDSEEAREFMEIMKEILLLNGASNLGDYLPILRLFDFQGLEKRMLKLRDRADGFLQNLVDRHREKKTSNSKEKDRKNMIDNLLSLQESDPDYYTDDIIKSLVLTMLAGGTDTTTGTIEWAFSLLLNHPLVMKKALTEIRECISHHRLVDEGDLSRLPYLQAIINETLRLFPVAPVSIRESSEDCTIDGFYVPKGTMLMVNIWAIHRDSKVWEDPTSFRPERFGELEQVERIGKLIPFGMGRRACPGAGLAHRVVGLTLAALIQCFEWERIDDEEIDLSQGSGITMPKAKALEAMCRVRTSIVDVLSGL | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 3419287 | 3420917 | + | evm.model.ptg000002l.1075 | HCH12g0584 | 555431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0584 | 511 | FunFam | Cytochrome P450 family protein | 29 | 504 | - | - | |
| HCH12g0584 | 511 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | CDD | CYP81 | 69 | 494 | - | - | |
| HCH12g0584 | 511 | Gene3D | Cytochrome P450 | 23 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | SUPERFAMILY | Cytochrome P450 | 38 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PANTHER | CYTOCHROME P450 82C3-RELATED | 17 | 502 | IPR050651 | - | |
| HCH12g0584 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 89 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 184 | 202 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0584 | 511 | Pfam | Cytochrome P450 | 38 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0584 | HCH-Chr12:3419287 | HCH12g0587 | HCH-Chr12:3438646 | 1.60E-206 | dispersed | |
| HCH12g0583 | HCH-Chr12:3413556 | HCH12g0584 | HCH-Chr12:3419287 | 6.00E-139 | tandem | |
| HCH12g0584 | HCH-Chr12:3419287 | HCH12g0585 | HCH-Chr12:3426316 | 5.10E-208 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0584 | K13260 | - | csv:101207002 | 626.706 |