Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g0585 ATGATTCTCTCTATGGAAGAGACGTGGTACTTTTATTTTCTAATCCCCCTCTTTCTTTTACTTACTCTTCATCTTTCTAAACGCAAAACAGTGAGTCACAGAAAGCTTCCACCGAGTCCCCTTTCCTTTCCGATCATCGGCCATCTTCATCTTATCAAAGAGCCTCTCCATCGAGTGTTGCAGAATCTATCACACAAATATGGTCCAATCTTATCACTTTCATTTGGCTCGCACCCTGTGCTTGTTATATCCTCCCCCTCCGCCGTGCAAGAGTGCTTCACGAAGAATGATATTATTTTTGCCAATAGACCACGTTTGCTTTTTGGGAAGCTCTTGGCCTATAACAATTCAACTGTAGGTTTTGCCCCCTATGGTGACCATTGGCTCAACCTCCGCCGCTTAACTGCGACGGAGCTTCTGTCGACTCAACGTATGAATATGTTTGTAAACACTCGACAGGAAGAGTTCAGATTATGGCTTAAAAATCTGTTTGAAATTACAAGGGAAGGTTTTGTTGAAGTGGAGATGAAGTCCAAATTGAATGAGTTGTCTTTTAACATTATGATGAAGATGATAAGTGGGAAACGCTACTTTGGAGTTCAAGTGGAGGATTTTGAGGAGGCGAGGGAGTTTAGAGGGATTATGAGGGAACTTGTTCAGCTAAGTGGAGCGTCAAATCCTGGAGACTTTTTGCCACTTTTGAGATCGTTTGATTATCAAGGACTTGAAAAAAGGATGGTGAAAGTTCGGGATCATGCAGATGTTTTCTTACAAAATCTTGTTGACAGGCATCGGAAAAAGAAGGCTTCTTCAAGTGGTAGAGAGGAGAAAGATGTCACTAGAAATACGATGATTGATAATTTTCTCTCGTTACAAGAATCGGATCTTGAACATTATTCTGATGACATAATTAAAGGTCAAGTTTTGAGCATACTGGCTGCTGGGACTGATACAACAACAACGACAAGTGAGTGGGCTATGTCACTTCTCTTAAACCATCCTTTAATTCTGAAAAAAGCTTGGATTGAGATCAATGAGTGTATCGGTCAACAACGGCTGGTGGAAGAAGGAGATCTTAGCAAGCTTTCGTATCTTGAAGCCATAATTAACGAGACCCTTCGATTGTTTCCTGCAGCTCCATTGTTGCTGCCTCATGAATCATCTGAAGACTGTACAATCGAAGGATTTTACGTACCGAAAGGAACGATGTTGCTAGTTAACGTATGGGCCATCCACAGAGACCCCAAAGTGTGGAATGATCCAACAAGTTTTAAACCAGAGAGATTTGGAGAATTGGAGAAAATTGAAGCAACAAAGTTGATACCATTTGGAATGGGGAGGAGGGCATGTCCAGGGGCTGCTCTTGCACACAGGGTGGTGGGATTGACATTGGCGACTCTTATTCAATGCTTCGAGTGGGAGAGAATTGGGAAAGAGGAAATAGATTTGTGTGAAGGATCTGGAAGCATCACGCCCAAAGTCAAGCCACTGGAGGCAAGGTGCAAAGTTCGAAGTTGCATGATTGATGTATTATCTCAACTAATTTGA 1548 42.18 MILSMEETWYFYFLIPLFLLLTLHLSKRKTVSHRKLPPSPLSFPIIGHLHLIKEPLHRVLQNLSHKYGPILSLSFGSHPVLVISSPSAVQECFTKNDIIFANRPRLLFGKLLAYNNSTVGFAPYGDHWLNLRRLTATELLSTQRMNMFVNTRQEEFRLWLKNLFEITREGFVEVEMKSKLNELSFNIMMKMISGKRYFGVQVEDFEEAREFRGIMRELVQLSGASNPGDFLPLLRSFDYQGLEKRMVKVRDHADVFLQNLVDRHRKKKASSSGREEKDVTRNTMIDNFLSLQESDLEHYSDDIIKGQVLSILAAGTDTTTTTSEWAMSLLLNHPLILKKAWIEINECIGQQRLVEEGDLSKLSYLEAIINETLRLFPAAPLLLPHESSEDCTIEGFYVPKGTMLLVNVWAIHRDPKVWNDPTSFKPERFGELEKIEATKLIPFGMGRRACPGAALAHRVVGLTLATLIQCFEWERIGKEEIDLCEGSGSITPKVKPLEARCKVRSCMIDVLSQLI 515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 3426316 3427973 + evm.model.ptg000002l.1074 HCH12g0585 555432
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH12g0585 515 Gene3D Cytochrome P450 29 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH12g0585 515 CDD CYP81 68 497 - -
HCH12g0585 515 PANTHER CYTOCHROME P450 82C3-RELATED 17 504 IPR050651 -
HCH12g0585 515 FunFam Cytochrome P450 family protein 27 507 - -
HCH12g0585 515 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0585 515 Pfam Cytochrome P450 37 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0583 HCH-Chr12:3413556 HCH12g0585 HCH-Chr12:3426316 5.90E-203 dispersed
HCH12g0585 HCH-Chr12:3426316 HCH12g0587 HCH-Chr12:3438646 7.40E-191 dispersed
HCH12g0584 HCH-Chr12:3419287 HCH12g0585 HCH-Chr12:3426316 5.10E-208 tandem
HCH12g0585 HCH-Chr12:3426316 HCH12g0586 HCH-Chr12:3432300 1.40E-101 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g0585 K13260 - csv:101207002 636.721