Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0585 | ATGATTCTCTCTATGGAAGAGACGTGGTACTTTTATTTTCTAATCCCCCTCTTTCTTTTACTTACTCTTCATCTTTCTAAACGCAAAACAGTGAGTCACAGAAAGCTTCCACCGAGTCCCCTTTCCTTTCCGATCATCGGCCATCTTCATCTTATCAAAGAGCCTCTCCATCGAGTGTTGCAGAATCTATCACACAAATATGGTCCAATCTTATCACTTTCATTTGGCTCGCACCCTGTGCTTGTTATATCCTCCCCCTCCGCCGTGCAAGAGTGCTTCACGAAGAATGATATTATTTTTGCCAATAGACCACGTTTGCTTTTTGGGAAGCTCTTGGCCTATAACAATTCAACTGTAGGTTTTGCCCCCTATGGTGACCATTGGCTCAACCTCCGCCGCTTAACTGCGACGGAGCTTCTGTCGACTCAACGTATGAATATGTTTGTAAACACTCGACAGGAAGAGTTCAGATTATGGCTTAAAAATCTGTTTGAAATTACAAGGGAAGGTTTTGTTGAAGTGGAGATGAAGTCCAAATTGAATGAGTTGTCTTTTAACATTATGATGAAGATGATAAGTGGGAAACGCTACTTTGGAGTTCAAGTGGAGGATTTTGAGGAGGCGAGGGAGTTTAGAGGGATTATGAGGGAACTTGTTCAGCTAAGTGGAGCGTCAAATCCTGGAGACTTTTTGCCACTTTTGAGATCGTTTGATTATCAAGGACTTGAAAAAAGGATGGTGAAAGTTCGGGATCATGCAGATGTTTTCTTACAAAATCTTGTTGACAGGCATCGGAAAAAGAAGGCTTCTTCAAGTGGTAGAGAGGAGAAAGATGTCACTAGAAATACGATGATTGATAATTTTCTCTCGTTACAAGAATCGGATCTTGAACATTATTCTGATGACATAATTAAAGGTCAAGTTTTGAGCATACTGGCTGCTGGGACTGATACAACAACAACGACAAGTGAGTGGGCTATGTCACTTCTCTTAAACCATCCTTTAATTCTGAAAAAAGCTTGGATTGAGATCAATGAGTGTATCGGTCAACAACGGCTGGTGGAAGAAGGAGATCTTAGCAAGCTTTCGTATCTTGAAGCCATAATTAACGAGACCCTTCGATTGTTTCCTGCAGCTCCATTGTTGCTGCCTCATGAATCATCTGAAGACTGTACAATCGAAGGATTTTACGTACCGAAAGGAACGATGTTGCTAGTTAACGTATGGGCCATCCACAGAGACCCCAAAGTGTGGAATGATCCAACAAGTTTTAAACCAGAGAGATTTGGAGAATTGGAGAAAATTGAAGCAACAAAGTTGATACCATTTGGAATGGGGAGGAGGGCATGTCCAGGGGCTGCTCTTGCACACAGGGTGGTGGGATTGACATTGGCGACTCTTATTCAATGCTTCGAGTGGGAGAGAATTGGGAAAGAGGAAATAGATTTGTGTGAAGGATCTGGAAGCATCACGCCCAAAGTCAAGCCACTGGAGGCAAGGTGCAAAGTTCGAAGTTGCATGATTGATGTATTATCTCAACTAATTTGA | 1548 | 42.18 | MILSMEETWYFYFLIPLFLLLTLHLSKRKTVSHRKLPPSPLSFPIIGHLHLIKEPLHRVLQNLSHKYGPILSLSFGSHPVLVISSPSAVQECFTKNDIIFANRPRLLFGKLLAYNNSTVGFAPYGDHWLNLRRLTATELLSTQRMNMFVNTRQEEFRLWLKNLFEITREGFVEVEMKSKLNELSFNIMMKMISGKRYFGVQVEDFEEAREFRGIMRELVQLSGASNPGDFLPLLRSFDYQGLEKRMVKVRDHADVFLQNLVDRHRKKKASSSGREEKDVTRNTMIDNFLSLQESDLEHYSDDIIKGQVLSILAAGTDTTTTTSEWAMSLLLNHPLILKKAWIEINECIGQQRLVEEGDLSKLSYLEAIINETLRLFPAAPLLLPHESSEDCTIEGFYVPKGTMLLVNVWAIHRDPKVWNDPTSFKPERFGELEKIEATKLIPFGMGRRACPGAALAHRVVGLTLATLIQCFEWERIGKEEIDLCEGSGSITPKVKPLEARCKVRSCMIDVLSQLI | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 3426316 | 3427973 | + | evm.model.ptg000002l.1074 | HCH12g0585 | 555432 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0585 | 515 | Gene3D | Cytochrome P450 | 29 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 323 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 303 | 320 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | SUPERFAMILY | Cytochrome P450 | 37 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0585 | 515 | CDD | CYP81 | 68 | 497 | - | - | |
| HCH12g0585 | 515 | PANTHER | CYTOCHROME P450 82C3-RELATED | 17 | 504 | IPR050651 | - | |
| HCH12g0585 | 515 | FunFam | Cytochrome P450 family protein | 27 | 507 | - | - | |
| HCH12g0585 | 515 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | P450 superfamily signature | 314 | 331 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0585 | 515 | Pfam | Cytochrome P450 | 37 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0583 | HCH-Chr12:3413556 | HCH12g0585 | HCH-Chr12:3426316 | 5.90E-203 | dispersed | |
| HCH12g0585 | HCH-Chr12:3426316 | HCH12g0587 | HCH-Chr12:3438646 | 7.40E-191 | dispersed | |
| HCH12g0584 | HCH-Chr12:3419287 | HCH12g0585 | HCH-Chr12:3426316 | 5.10E-208 | tandem | |
| HCH12g0585 | HCH-Chr12:3426316 | HCH12g0586 | HCH-Chr12:3432300 | 1.40E-101 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0585 | K13260 | - | csv:101207002 | 636.721 |